Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 720 a.a., Type I secretion system ATPase, HlyB from Pseudomonas syringae pv. syringae B728a

 Score =  215 bits (548), Expect = 5e-60
 Identities = 172/593 (29%), Positives = 296/593 (49%), Gaps = 42/593 (7%)

Query: 23  SWLITQVKKHRAKLLFANFIAVVATLISVPIPLLMPLMVDEVLLNHPAKGVEVMNQFLPQ 82
           +W I  + K+R  L     ++ V  + S+  PL   +++D+VL++H    ++V       
Sbjct: 149 TWFIPAIVKYRKLLGEVMLVSFVLQIFSLITPLFFQVVMDKVLVHHGLTTLDV------- 201

Query: 83  GWQTATGYIMLTLLMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKMIEKLGRISIRQ 142
                   I + L  V++   A   L+ L++  F   +  I  E+  K+   L  + +  
Sbjct: 202 --------IAIGLAGVMLFESA---LSGLRTYVFAHTASRIDVELGSKLFRHLITLPLSY 250

Query: 143 YETRGSGGINAHLITDIETIDQFI-GSTLSKFLISLLTVIGTAIVLLWLEWRLGLFILLV 201
           ++ R  G   A  + ++E I  F+ G+ ++  L  L +V+  A++  +  W L L +LL 
Sbjct: 251 FQARRVGDSVAR-VRELENIRNFLTGNAITLLLDVLFSVVFIAVMFYYSGW-LTLIVLLS 308

Query: 202 NPIVIYFSRMLGSQVKHLKKRENQAFERF---QNRLVETLDGIYQLRAANKE----REFL 254
            P+ I  S ++      L+KR N +F R    Q  LVET++GI  L++   E    R++ 
Sbjct: 309 LPLYILVSVLI---TPVLRKRLNDSFARGAENQAFLVETVNGIDTLKSMAVEPQAIRKWD 365

Query: 255 NRLISDADAVRENADKYAWQSEAAGRLSFLLFLLGFELFRAVAMLMVVFSDLTIGQIFAV 314
           N+L     A  +  +     +E+   +  L+ +            +V+   L++GQ+ A 
Sbjct: 366 NQLAGYVAAGFKTQNLSTIANESVSLIGKLVTVATLWF----GARLVIDGQLSVGQLIAF 421

Query: 315 FGYLWFMLSPVQELLGIQFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEVDIEI 374
                 +  P+  L  +  ++     +++R+  +L    E   +++       G   IE 
Sbjct: 422 NMLAGRVAQPIMRLAQLWTNFQQTGVSVQRLGDILNTRNELSQVNRSALPPIKGR--IEF 479

Query: 375 NNIHFSY--DGESQVLNDLSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIRFN 432
           + +HF Y  DG S++L  ++L I  G+ + +VG SG GKSTL +LL  +Y  + G +  +
Sbjct: 480 DQVHFRYRPDG-SEILRGINLVITPGQVIGVVGRSGSGKSTLTRLLQRLYVPERGRVLVD 538

Query: 433 GQHCDDISFDVIRDQIAVVLQQPILFNDTLRHNLTLGGQFSD-DVLWQALDIAQLQDVIT 491
           G          +R QI VVLQ  +LFN ++R N+ L    +  + + Q   +A   D I 
Sbjct: 539 GMDLALADVSSLRRQIGVVLQDNMLFNRSIRENIALSDAGAPLEAVMQMAKLAGAHDFIL 598

Query: 492 KLDQGLESQIGRNGIRLSGGQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHLALS 551
           +L +G ++ +G +G  LSGGQRQR+AIAR ++ NP+ +I DEATSALD  +E  +   + 
Sbjct: 599 ELPEGYDTMVGEHGASLSGGQRQRIAIARALMGNPRILIFDEATSALDYESERIVQQNMQ 658

Query: 552 KFLHGRTTLIVAHRLSAVKQADLIYVLEDGHVSQSGTHHELL-EQEGLYQTLY 603
               GRT +I+AHRLSAV+ A+ I V++ G + + GTH ELL  Q G Y  L+
Sbjct: 659 AICKGRTVIIIAHRLSAVRDANRIVVVDRGQIVEQGTHAELLTHQAGHYSRLH 711