Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  232 bits (591), Expect = 4e-65
 Identities = 169/583 (28%), Positives = 292/583 (50%), Gaps = 29/583 (4%)

Query: 32  HRAKLLFANFIAVVATLISVPIPLLMPLMVDEVLLNHPAK----GVEVMNQFLPQGWQTA 87
           H+ ++L A   +++  +  +  P+L+ + VD V+    +     GV  + Q L       
Sbjct: 15  HQRQVLSAIACSILNKIFDLAPPVLIGMAVDVVVQRQDSWLAKWGVVPVEQQLG------ 68

Query: 88  TGYIMLTLLMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKMIEKLGRISIRQYETRG 147
               +L L   V+  + S L   L + Q+  +++T+ +E+R      L  + +  +E R 
Sbjct: 69  ----LLVLFSFVIWSLES-LFEYLYAWQWRTLAQTLQHELRLDAYGHLQELELSFFEERS 123

Query: 148 SGGINAHLITDIETIDQFIGSTLSKFLISLLTVIGTAIVLLWLEWRLGLFILLVNPIVIY 207
           +G + + L  DI  +++F+    ++ L    TV+     + +L   +    +L  P++++
Sbjct: 124 TGQLLSVLNDDINQLERFLDHGANEILQVTTTVLAVGGAMAYLSPTVAGLAILPIPVILW 183

Query: 208 FSRMLGSQVKHLKKRENQAFERFQNRLVETLDGIYQLRAANKEREFLNRLISDADAVRE- 266
            S     ++     R  +       RL   L GI  +++   E     R+  D+DA R+ 
Sbjct: 184 GSLRFQRRLAPRYARVREQAGLISARLANNLGGIATIKSFTAEAFEKGRVAEDSDAYRQA 243

Query: 267 NADKYAWQSEAAGRLSFLLFLLGFELFRAVAMLMVVFSDLTIGQI-FAVFGYLWF----M 321
           N    A  S     + F +      LF  +A+L V   +   G++    + +L F    +
Sbjct: 244 NRRAIALSSAFVPLIRFAI------LFAFIAILYVGGMETINGRLDVGTYSFLVFITQRL 297

Query: 322 LSPVQELLGIQFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEVDIEINNIHFSY 381
           L P+  L  +   +  A A+ +R+  LL +  +     +  P  Q+ +  ++   I F+Y
Sbjct: 298 LWPLTSLGRVLDDYQRAMASTQRVMDLLAIPVQIPSGRQSLPIGQV-QGAVQFEGITFAY 356

Query: 382 DGESQVLNDLSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIRFNGQHCDDISF 441
                 + DL+L+IPAG+ +A+VGA+G GKSTL++LL+  Y  Q+G I  +G    D+  
Sbjct: 357 RDREPSVIDLNLNIPAGQTIAIVGATGSGKSTLVKLLLRFYEPQTGRILLDGIDLRDLKL 416

Query: 442 DVIRDQIAVVLQQPILFNDTLRHNLTLGG-QFSDDVLWQALDIAQLQDVITKLDQGLESQ 500
             +R  I  V Q   LF+ ++  N+  G    +   + QA  +A+  + I  L QG ++ 
Sbjct: 417 KDLRQAIGFVSQDVFLFHGSVAENIAYGSFDATQTEIEQAAKLAEAHEFIMDLPQGYDTV 476

Query: 501 IGRNGIRLSGGQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHLALSKFLHGRTTL 560
           +G  G +LSGGQRQRLAIAR +L +P  +ILDEATSA+D  TEAA+  +L +    RTTL
Sbjct: 477 VGERGQKLSGGQRQRLAIARAILKDPPILILDEATSAVDNETEAAIQRSLEQITRDRTTL 536

Query: 561 IVAHRLSAVKQADLIYVLEDGHVSQSGTHHELLEQEGLYQTLY 603
            +AHRLS ++ AD IYV++ G + ++G H ELL  +GLY  L+
Sbjct: 537 AIAHRLSTIRHADCIYVMDQGRLVEAGHHDELLALDGLYANLW 579