Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 600 a.a., ABC transporter, transmembrane region: ABC transporter from Marinobacter adhaerens HP15

 Score =  248 bits (633), Expect = 5e-70
 Identities = 169/580 (29%), Positives = 286/580 (49%), Gaps = 17/580 (2%)

Query: 25  LITQVKKHRAKLLFANFIAVVATLISVPIPLLMPLMVDEVLLNHPAKGVEVMNQFLPQGW 84
           L+   + +R +++ A   +++  L  +   +L+ + +D V++N     V  +      G+
Sbjct: 18  LLRYARGYRRQIIAATTCSIINKLFDIAPEILIGVAID-VVVNQEESFVAGL------GF 70

Query: 85  QTATGYIMLTLLMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKMIEKLGRISIRQYE 144
           +TA   I +  ++   +     L   L    +  +++ +  ++R+   E   R+ +  +E
Sbjct: 71  ETAQEQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQSDLRQDAYEHAQRLDMSFFE 130

Query: 145 TRGSGGINAHLITDIETIDQFIGSTLSKFLISLLTVIGTAIVLLWLEWRLGLFILLVNPI 204
            R SG + A +  D+  +++F+    +  +  L+TV+    V   L   + L      P+
Sbjct: 131 ARSSGQLVATMNDDVNQLERFLDGGANAMIQVLVTVVAVGAVFFVLSPLIALLAFTPIPL 190

Query: 205 VI----YFSRMLGSQVKHLKKRENQAFERFQNRLVETLDGIYQLRAANKEREFLNRLISD 260
           +I    YF R  G     ++++         +RL   L GI  +++   E+    RL   
Sbjct: 191 IIWGAFYFQRKAGPLYADVREKVGD----LSSRLANNLGGIATIKSFTAEQREAKRLKES 246

Query: 261 ADAVRENADKYAWQSEAAGRLSFLLFLLGFELFRAVAMLMVVFSDLTIGQIFAVFGYLWF 320
           ++A  E   +    S A   +  +  L GF     V  +M +  +L +G    +      
Sbjct: 247 SEAYVEANRRAIRISSAFIPVIRMAILAGFLATFTVGGMMALEGNLNVGAYGVLVFLTQR 306

Query: 321 MLSPVQELLGIQFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEVDIEINNIHFS 380
           +L P+  L  +   +  A A+ +RI  LL      R         +  + D+E++ + F 
Sbjct: 307 LLWPLTGLAEVIDLFERAMASTRRILDLLAEPVHVRDEGG-KALAEPVKGDVELDKVSFH 365

Query: 381 YDGESQVLNDLSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIRFNGQHCDDIS 440
           Y      + D+SL +PAG  +ALVGA+G GKSTLI+LL+  Y   +G IR +GQ   D++
Sbjct: 366 YPSSGAGIQDISLTVPAGNTLALVGATGSGKSTLIKLLLRFYDPSNGQIRIDGQPIRDLN 425

Query: 441 FDVIRDQIAVVLQQPILFNDTLRHNLTLGGQFSDDV-LWQALDIAQLQDVITKLDQGLES 499
              +R  I +V Q   LF  T+R NL  G   + D  +  A   A+    I  L +GL +
Sbjct: 426 LQSLRGAIGLVSQDVYLFEGTIRENLAYGNPAASDTEIIDAAKTAEAWSFIEALPEGLNT 485

Query: 500 QIGRNGIRLSGGQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHLALSKFLHGRTT 559
            +G  G+RLSGGQRQRL++AR +L NP  ++LDEATSA+D  TEAA+  +L +  H RT 
Sbjct: 486 PVGERGVRLSGGQRQRLSLARALLKNPPILVLDEATSAVDNETEAAIQRSLKRIGHNRTV 545

Query: 560 LIVAHRLSAVKQADLIYVLEDGHVSQSGTHHELLEQEGLY 599
           +++AHRLS +  AD I V+E G V + GTH ELL+Q+G Y
Sbjct: 546 IMIAHRLSTIVDADSIAVIEGGKVLEQGTHRELLDQDGAY 585