Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., Lipid A export ATP-binding/permease protein MsbA from Enterobacter sp. TBS_079

 Score =  246 bits (627), Expect = 3e-69
 Identities = 162/566 (28%), Positives = 286/566 (50%), Gaps = 22/566 (3%)

Query: 46  ATLISVPIPLLMPLMVDEVLLNHPAKGVEVMNQFLPQGWQTATGYIMLTLLMVVV-MRIA 104
           A LI   + L++    D  +L+       ++   L  G+      +++ + +VV+ + I 
Sbjct: 25  AGLIVAGVALVLNAASDTFMLS-------LLKPLLDDGFGKTDRSVLIWMPLVVIGLMIL 77

Query: 105 SQLLNILQSRQFTLVSKTITYEMRRKMIEKLGRISIRQYETRGSGGINAHLITDIETIDQ 164
             + + + S   + VS  +   MRR++   +  + +  ++ + +G + + +  D E +  
Sbjct: 78  RGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVAS 137

Query: 165 FIGSTLSKFLISLLTVIGTAIVLLWLEWRLGLFILLVNPIVIYFSRMLGSQVKHLKKREN 224
              + L   +    ++IG  I++ +  W+L L ++++ P+V    R++  + +++ K   
Sbjct: 138 SSSNALITVVREGASIIGLFIMMFYYSWQLSLILIVLAPVVSIAIRVVSKRFRNISKNMQ 197

Query: 225 QAFERFQNRLVETLDGIYQLRAANKEREFLNRLISDADAVRENADKYAWQSEAAGRLSFL 284
               +      + L G  ++     +     R    ++ +R    K    S  +  +  L
Sbjct: 198 NTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQL 257

Query: 285 LFLLGFELFRAVAMLMVVFSDLTIGQIFAVFGYLWFMLSPVQELLGIQFSWYAAKAALKR 344
           +  L        A    V   LT G I  VF  +  ++ P++ L  +   +    AA + 
Sbjct: 258 IASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQT 317

Query: 345 INSLLELEEEY----RPISKVNPFTQLGEVDIEINNIHFSYDG-ESQVLNDLSLHIPAGK 399
           + S+L+ E+E     R I + +        D+E  N+ F+Y G E+  L +++L IPAGK
Sbjct: 318 LFSILDTEQEKDEGKREIERAHG-------DVEFRNVTFTYPGRETPALRNINLSIPAGK 370

Query: 400 KVALVGASGGGKSTLIQLLIGVYRAQSGAIRFNGQHCDDISFDVIRDQIAVVLQQPILFN 459
            VALVG SG GKST+  L+   Y    G I  +G    + +   +R+Q+A+V Q   LFN
Sbjct: 371 TVALVGRSGSGKSTIASLITRFYDIDEGEILLDGHDLREYTLQSLRNQVALVSQNVHLFN 430

Query: 460 DTLRHNLTLGG--QFSDDVLWQALDIAQLQDVITKLDQGLESQIGRNGIRLSGGQRQRLA 517
           DT+ +N+      ++S   + +A  +A   D I K+D GL++ IG NG+ LSGGQRQR+A
Sbjct: 431 DTVANNIAYARTEEYSRAEIEKAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIA 490

Query: 518 IARMVLSNPKFVILDEATSALDTATEAALHLALSKFLHGRTTLIVAHRLSAVKQADLIYV 577
           IAR +L +   +ILDEATSALDT +E A+  AL +    RT+L++AHRLS ++QAD I V
Sbjct: 491 IARALLRDSPILILDEATSALDTESERAIQSALDELQKNRTSLVIAHRLSTIEQADEIVV 550

Query: 578 LEDGHVSQSGTHHELLEQEGLYQTLY 603
           +EDG + + G+H +LL   G+Y  L+
Sbjct: 551 VEDGVIVERGSHSDLLAHRGVYAQLH 576