Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  249 bits (635), Expect = 3e-70
 Identities = 158/483 (32%), Positives = 260/483 (53%), Gaps = 4/483 (0%)

Query: 123 ITYEMRRKMIEKLGRISIRQYETRGSGGINAHLITDIETIDQFIGSTLSKFLISLLTVIG 182
           +  ++R  +  K+ R+ +  +     G I A +  D+  ++  I S+L   + S + +I 
Sbjct: 124 VVRDIRIMVYAKVMRLPMGFFSEERKGDIIARMSGDVGEVENSITSSLDMLIKSPIMIIL 183

Query: 183 TAIVLLWLEWRLGLFILLVNPIVIYFSRMLGSQVKHLKKRENQAFERFQNRLVETLDGIY 242
             I L+   W+L LF +LV P + +    +G ++K         +    ++L ETL G+ 
Sbjct: 184 YFITLIATSWKLTLFTVLVLPAMGWLMGKVGRKLKRQSLEAQGKWSDTMSQLEETLGGLR 243

Query: 243 QLRAANKEREFLNRLISDADAVRENADKYAWQSEAAGRLSFLL--FLLGFELFRAVAMLM 300
            ++A   E   ++R    ++ +R+  +K A +   A  +S  L   L+   L+   A+++
Sbjct: 244 IIKAFIAEDRMIDRFTRCSNELRDAVNKVAMRQALAHPMSEFLGTILIVSVLWFGGALIL 303

Query: 301 VVFSDLTIGQIFAVFGYLWFMLSPVQELLGIQFSWYAAKAALKRINSLLELEEEYRPISK 360
              S LT          L+ +++P+++     ++     A+++R++ +L+ E   + I  
Sbjct: 304 GHNSSLTAPTFIFYMVILYSVINPLKDFAKAGYNIPKGLASMERVDKILKAENNIKEIPN 363

Query: 361 VNPFTQLGEVDIEINNIHFSYDGESQVLNDLSLHIPAGKKVALVGASGGGKSTLIQLLIG 420
             P T + +  IE  +I FSYDG+ +VL  ++L +P GK VALVG SG GKSTL+ LL  
Sbjct: 364 PKPLTGMND-RIEFKDISFSYDGKREVLKHVNLTVPKGKTVALVGQSGSGKSTLVDLLPR 422

Query: 421 VYRAQSGAIRFNGQHCDDISFDVIRDQIAVVLQQPILFNDTLRHNLTLGGQFSD-DVLWQ 479
            +  Q G I  +G    D+    +R  I  V Q+ ILFNDT  +N+  G + +  + + +
Sbjct: 423 YHDVQGGDITIDGTSIKDVRIADLRSLIGNVNQEAILFNDTFFNNIAFGVENATMEQVIE 482

Query: 480 ALDIAQLQDVITKLDQGLESQIGRNGIRLSGGQRQRLAIARMVLSNPKFVILDEATSALD 539
           A  IA   D I +  +G  + IG  G +LSGGQRQR++IAR +L NP  +ILDEATSALD
Sbjct: 483 AAKIANAHDFIMEKPEGYNTNIGDRGGKLSGGQRQRVSIARAILKNPPILILDEATSALD 542

Query: 540 TATEAALHLALSKFLHGRTTLIVAHRLSAVKQADLIYVLEDGHVSQSGTHHELLEQEGLY 599
           T +E  +  AL + +  RTT+ +AHRLS +K AD I VL +G + + G H ELLE +G Y
Sbjct: 543 TESERLVQEALERLMKTRTTIAIAHRLSTIKNADEICVLYEGEIVERGRHEELLELDGYY 602

Query: 600 QTL 602
           + L
Sbjct: 603 KRL 605