Pairwise Alignments

Query, 208 a.a., RNA chaperone ProQ from Vibrio cholerae E7946 ATCC 55056

Subject, 215 a.a., putative solute/DNA competence effector (RefSeq) from Shewanella loihica PV-4

 Score =  210 bits (534), Expect = 2e-59
 Identities = 108/212 (50%), Positives = 145/212 (68%), Gaps = 6/212 (2%)

Query: 1   MENTEKLKNSKEVIAYIAECFPNCFTLEGEAKPLKIGIFQDLADRLNDDPKVSKTQLRAA 60
           ME+TEKL ++  ++AY+ E FP CF  EGE KPLKIG+FQDLA+RL DD KVSKTQLR A
Sbjct: 2   MESTEKLTDTNAILAYLYETFPLCFIAEGETKPLKIGLFQDLAERLADDSKVSKTQLRIA 61

Query: 61  LRQYTSSWRYLHGVKPGATRVDLDGNPCGELEEQHVEHAQAALAESKARVEARRKEQVKK 120
           LR+YTSSWRYL GVK GA RVDLDGN CGELE++H++HAQA L ES+ + +A+R  +   
Sbjct: 62  LRRYTSSWRYLKGVKAGAQRVDLDGNECGELEQEHIDHAQATLKESQEKAKAKRAAKAAA 121

Query: 121 VREEAKANKPKA---KKPQQARRPQNAPKVEKKPVETRALA---ASELNVGNQVNVNMGK 174
            + +    KP+    KKP   R  + A K  K  VE + L+    +EL    +V+V +GK
Sbjct: 122 EKTDKSGPKPEKKAFKKPLPKRSSKPASKAAKPQVEAKDLSPATLTELKPNQRVSVKLGK 181

Query: 175 GNMAATIVEVNKEDVRVQLANGLQMVVKAEHL 206
             +A  ++++ KEDV+VQL +GL + V  EH+
Sbjct: 182 SPVAGVVLDIKKEDVQVQLDSGLTVKVPVEHI 213