Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., Carboxyl-terminal protease (EC 3.4.21.102) from Xanthomonas campestris pv. campestris strain 8004

 Score =  127 bits (320), Expect = 9e-34
 Identities = 98/336 (29%), Positives = 172/336 (51%), Gaps = 34/336 (10%)

Query: 198 NAIKRLTQTKSED--VFQTYMNAFAREVDPHTSYLSPRNAEQFQSEMNLSLEGIGAVLQM 255
           NA+K+      ED  +    +     ++DPH++Y    +AE F  +   + +GIG  L  
Sbjct: 59  NAVKQAYVDPVEDKKLMHAAVRGLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQ 118

Query: 256 TDDYTI-IRSLVAGGPAALSKQLGEGDRIIGVGQEGEDVVDVVGWRLDDVVQLIKGPKGS 314
             D T+ + + +   PAA +  +  GD I+ +  +  D            ++ ++G  GS
Sbjct: 119 QQDNTLKVIAPIDDTPAARAG-VKAGDVIVAIDGKPIDA--------SKAMEPLRGESGS 169

Query: 315 KVKLLVLPEGKDAKSHVVTIVRDKIRLEDRAVKSEVIEKAGKKIGVLEVPSFYVGLAQDT 374
           KV L ++ + K AK   +T+ R+ IR+   +V+S+++E      G + + +F      D 
Sbjct: 170 KVTLTIVRD-KVAKPFDITLQRETIRVA--SVRSKLLEPG---YGYIRISTFQADTGADF 223

Query: 375 EKLLAELKAK-KVDGIIVDLRNNGGGALTEATALSGLFITSGPVVQVRDSYGRVNVNSD- 432
           +K L +L+A  K+ G+++DLR+N GG LT A  ++   +  G +V  R   GR++++   
Sbjct: 224 QKNLKQLQAGGKLRGLVLDLRSNPGGLLTSAVQVADDLLDKGNIVSTR---GRISISDAK 280

Query: 433 ---TDGSISYSGPMTVLINRYSASASEIFAAAMQDYGRAIILGENSFGKGTVQQHRSLNH 489
              T G +    P+ VL++  SASASE+ A A++D  RA I+G  +FGKG+VQ    L++
Sbjct: 281 FDATPGDLLGGAPVVVLVDAGSASASEVLAGALRDNQRARIIGSRTFGKGSVQTVLPLDN 340

Query: 490 IYDLFDKELGYVQYTIQKFYRIDGGSTQNKGVVPDI 525
                      V+ T  ++Y   G S Q  G+VP++
Sbjct: 341 --------GDSVKLTTARYYTPSGKSIQASGIVPEV 368