Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., C-terminal processing peptidase-2. Serine peptidase. MEROPS family S41A from Synechococcus elongatus PCC 7942

 Score =  121 bits (303), Expect = 7e-32
 Identities = 100/373 (26%), Positives = 176/373 (47%), Gaps = 34/373 (9%)

Query: 158 KDLKEINELWRQRVKYDALSLKLAGKEWPEIKETLDKRYNNAIKRLTQTKSEDVFQTYMN 217
           ++ K  NE WR  V    +        W +++E + K+             +  +     
Sbjct: 30  EEQKLFNEAWRI-VNQSYVDPSFNHSNWFQLREKILKK--------PLDNRDQTYTAIEG 80

Query: 218 AFAREVDPHTSYLSPRNAEQFQSEMNLSLEGIGAVL--QMTDDYTIIRSLVAGGPAALSK 275
             A+  DP T  L P      Q      L G+G  +  +      ++ + + G PAAL+ 
Sbjct: 81  LLAKLDDPFTRLLRPDQYRNLQVSTAGELSGVGLQIGFEAESGDVVVIAPIEGSPAALAG 140

Query: 276 QLGEGDRIIGVGQEGEDVVDVVGWRLDDVVQLIKGPKGSKVKLLVLPEGKDAKSHVVTIV 335
            L  GDRI+ V     D V + G  LD+    ++GP+G+ V L VL   +D ++    +V
Sbjct: 141 LLS-GDRILTV-----DGVAISGRDLDEAAARMRGPRGTTVALQVL---RDQQTLDFELV 191

Query: 336 RDKIRLEDRAVKSEVIEKAGKK--IGVLEVPSFYVGLAQDTEKLLAELKAKKVDGIIVDL 393
           RD+I L    V+S+ +++ G    IG + +  F    + +    +A+L  +  +  ++DL
Sbjct: 192 RDRISLNP--VRSQ-LDRDGDHPPIGYIRLSQFNANASVEVAHAIAQLDQQGAEAFVLDL 248

Query: 394 RNNGGGALTEATALSGLFITSGPVVQVRDSYGRVNVNSDTDGSISYSGPMTVLINRYSAS 453
           RNN GG LT    ++  ++  G +V   +  G ++ +   +G      P+ +L+NR +AS
Sbjct: 249 RNNSGGLLTAGIEIAREWLNEGAIVYTVNRQGVLD-SFAANGQALTDKPLALLVNRGTAS 307

Query: 454 ASEIFAAAMQDYGRAIILGENSFGKGTVQQHRSLNHIYDLFDKELGYVQYTIQKFYRIDG 513
           ASEI A A+QD  RAI++G+ +FGKG +Q       +++L D     +  T+ K+   + 
Sbjct: 308 ASEILAGALQDNERAILVGDRTFGKGLIQS------LFELSDG--AGLAVTVAKYETPNH 359

Query: 514 GSTQNKGVVPDIA 526
                +G+ PD+A
Sbjct: 360 NDINKQGIQPDLA 372