Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., C-terminal processing peptidase-2. Serine peptidase. MEROPS family S41A from Synechococcus elongatus PCC 7942

 Score =  114 bits (286), Expect = 7e-30
 Identities = 81/374 (21%), Positives = 176/374 (47%), Gaps = 32/374 (8%)

Query: 155 PWPKDLKEINELWRQRVKYDALSLKLAGKEWPEIK-ETLDKRYNNAIKRLTQTKSEDVFQ 213
           PW    K + +   Q +  + +      ++W  ++ E L + Y +         +E+ + 
Sbjct: 36  PWQDSPKVVLDQAWQLIDREYVDPTFNRQDWQAVRRELLSRNYGS---------NEEAYA 86

Query: 214 TYMNAFAREVDPHTSYLSPRNAEQFQSEMNLSLEGIGAVL--QMTDDYTIIRSLVAGGPA 271
              +A  R  DP+T +L+P   +    +      GIG  +     D    I++++   PA
Sbjct: 87  ALRSALRRLDDPYTRFLAPEQFKTLTEQTAGEASGIGIEIIPDSKDSRPRIQAILDNSPA 146

Query: 272 ALSKQLGEGDRIIGVGQEGEDVVDVVGWRLDDVVQLIKGPKGSKVKLLVLPEGKDAKSHV 331
           +    +  GDRI+ +  +    +      LD+V   ++G  GS++ L +          +
Sbjct: 147 SKG-DVQVGDRILAIDADSTRELT-----LDEVRNRLQGKVGSEIDLKL-----QRGDRI 195

Query: 332 VTIVRDKIRLEDRAVKSEVIEKAGKKIGVLEVPSFYVGLAQDTEKLLAELKAKKVDGIIV 391
            ++   ++++E  +V +E+ + +G+ +G +++  F    A++    +  L  +     ++
Sbjct: 196 FSVKLTRVQIEIPSVTAELRQHSGRSVGYIQLREFTAHAAREMRTSIRSLDEQGATSYVL 255

Query: 392 DLRNNGGGALTEATALSGLFITSGPVVQVRDSYGRVNVNSDTDGSISYSGPMTVLINRYS 451
           DLR N GG L  +  ++ +++ +G +V+  D  G+    +  + +I+ + P+ VL+++ S
Sbjct: 256 DLRGNPGGLLYSSIEIARMWLNNGTIVKTVDRNGKSETINANNSAIT-NKPLAVLVDQNS 314

Query: 452 ASASEIFAAAMQDYGRAIILGENSFGKGTVQQHRSLNHIYDLFDKELGYVQYTIQKFYRI 511
           AS+SEI   A++D  RA+++G  +FGK  VQ   +L         +   +  T+  +Y  
Sbjct: 315 ASSSEILVGALKDNNRAVVIGRQTFGKALVQSVHTL--------ADGSGLAVTVAHYYTP 366

Query: 512 DGGSTQNKGVVPDI 525
           +G    N+G+ PD+
Sbjct: 367 NGTDLGNRGIQPDV 380