Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., carboxyl-terminal protease from Sinorhizobium meliloti 1021

 Score = 53.5 bits (127), Expect = 2e-11
 Identities = 68/300 (22%), Positives = 130/300 (43%), Gaps = 36/300 (12%)

Query: 238 FQSEMNLSLEGIGAVLQMTDDYTIIRSLVAGGPAALSKQLGEGDRIIGVGQEGEDVVDVV 297
           F  +   S  G+G V +M +    +  +  G PA  +     G R+      G++V+ V 
Sbjct: 123 FPPDGRASYAGVGMVTRMENGLPFVSDVYDGSPADKA-----GIRV------GDEVLSVD 171

Query: 298 GWRLDDVVQLIKGPKGSKVKLLVLPEGKDAKSHVVTIVRDKIR---LEDRAVKSEVIEKA 354
           G    ++ +  +G  G KV++  L     A+    ++  +++R     ++A+++ V    
Sbjct: 172 GAPYREI-ESFRGRTGQKVEIR-LRRNAGAQPFTTSVAVERLRPLPTFEKAIENSVSVNV 229

Query: 355 --GKKIGVLEVPSFYVGLAQD-TEKLLAELKAKKVDGIIVDLRNNGGGALTEATALSGLF 411
             G++IG L + +       D   + LA  + K  DG++VDLR   GG   +A   + LF
Sbjct: 230 SDGRRIGYLRLWTLSSPDGLDIAARELATGRLKDADGVVVDLRGRWGGGPPDA---AELF 286

Query: 412 ITSGPVVQVRDSYGRVNVNSDTDGSISYSGPMTVLINRYSASASEIFAAAMQDYGRAIIL 471
           +   P  ++    G+     D   ++ +  P+  +I+  S S  E+FA A++  G  ++ 
Sbjct: 287 VGDTPNFRLISRSGK-----DMLANVRWRRPVVAIIDEGSRSGLELFAYALKANGIPLV- 340

Query: 472 GENSFGKGTVQQHRSLNHIYDLFDKELGYVQYTIQKFYRIDGGSTQNKGVVPDIAYPTAI 531
           G  + G             Y L D  +  ++  +      DG   + +GV PD+  P A+
Sbjct: 341 GTRTAGA------LLAGRAYLLPDDSM--LELAVSDAVIDDGVRLEGRGVEPDVPVPFAL 392