Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., carboxy-terminal protease (RefSeq) from Shewanella amazonensis SB2B

 Score =  779 bits (2011), Expect = 0.0
 Identities = 395/657 (60%), Positives = 499/657 (75%), Gaps = 9/657 (1%)

Query: 16  LAAFSAQALEAKLKPEDLPLLVPEAQHATAAKRVTSRFTRSHYKQFNLDDQFSQAMFERY 75
           L   SA A+   ++ ++LP LV E QH  A+KRV   FTRSHY +F+LDD FS+ +F+RY
Sbjct: 14  LVGSSAWAIAPAIQIDELPSLVQEPQHKVASKRVADLFTRSHYHRFSLDDAFSEQIFDRY 73

Query: 76  LEMLDYSRNIFTQADIDSFKAWSLQLDDQLKAGDNQIAYDLYNLSMEKRFERFQYALSLL 135
           L+ LDY RN+ TQAD+ +F+ +  Q DD LK GD   AYD+++L+ ++R+E F YALSLL
Sbjct: 74  LKQLDYRRNVLTQADVQNFEKYRHQFDDMLKNGDMTGAYDMFDLAQKRRYEGFVYALSLL 133

Query: 136 DQEMTFD-ADESIELDRTKSPWPKDLKEINELWRQRVKYDALSLKLAGKEWPEIKETLDK 194
           D+EM F  A +  + DR  +PW KD  EI ELWRQRVKYDAL+LKL GK W EI + L K
Sbjct: 134 DKEMDFSQAGDKYQYDREDAPWAKDEAEIQELWRQRVKYDALNLKLTGKNWTEIVDVLQK 193

Query: 195 RYNNAIKRLTQTKSEDVFQTYMNAFAREVDPHTSYLSPRNAEQFQSEMNLSLEGIGAVLQ 254
           RYNNAIKRL QT+SEDVFQT MNAF+R ++PHTSYLSPRNAE+FQ EMNLSLEGIGAVLQ
Sbjct: 194 RYNNAIKRLGQTQSEDVFQTVMNAFSRSIEPHTSYLSPRNAERFQMEMNLSLEGIGAVLQ 253

Query: 255 MTDDYTIIRSLVAGGPAALSKQLGEGDRIIGVGQEGEDVVDVVGWRLDDVVQLIKGPKGS 314
           M DDYT+I+S+VAGGPAA S++L   DRIIGVGQEG  VVDV+GWRLDDVV LIKGPKGS
Sbjct: 254 MDDDYTVIKSMVAGGPAASSEKLSPDDRIIGVGQEGGAVVDVIGWRLDDVVDLIKGPKGS 313

Query: 315 KVKLLVLPE--GKDAKSHVVTIVRDKIRLEDRAVKSEVIEK-----AGKKIGVLEVPSFY 367
           KV L +LP+  G +AK   VT+VRDKIRLEDRA  S+VIE      A +K+GV+++P FY
Sbjct: 314 KVTLQILPKKGGSNAKPVEVTLVRDKIRLEDRAATSKVIEPNEGQYANRKVGVIQIPGFY 373

Query: 368 VGLAQDTEKLLAELKAKKVDGIIVDLRNNGGGALTEATALSGLFITSGPVVQVRDSYGRV 427
           + L+QD  K L  LK  KV+G+I+DLR NGGGALTEA  L+GLFI  GPVVQVRD+ GRV
Sbjct: 374 MNLSQDVAKELQTLKEAKVEGVIIDLRGNGGGALTEAVLLTGLFIDMGPVVQVRDANGRV 433

Query: 428 NVNSDTDGSISYSGPMTVLINRYSASASEIFAAAMQDYGRAIILGENSFGKGTVQQHRSL 487
           + + D DG ++YSGP+TV+++RYSASASEIFAAA+QDY RA+I+GE++FGKGTVQQH+ L
Sbjct: 434 SQHRDNDGKVTYSGPLTVMVDRYSASASEIFAAALQDYQRALIVGESTFGKGTVQQHKGL 493

Query: 488 NHIYDLFDKELGYVQYTIQKFYRIDGGSTQNKGVVPDIAYPTAIAPSETGESVEDNALPW 547
             IYDL++K +G+VQYTIQKFYRI+GGSTQ KGV PDI +P+A+ P E GE+ EDNALPW
Sbjct: 494 ARIYDLYEKPVGHVQYTIQKFYRINGGSTQLKGVTPDIPFPSALEPGEYGEAEEDNALPW 553

Query: 548 DSIDKAKYERLNNFNT-IIASLEAKHQQRVANDLEFGFIEQDIAKYRAEKDDNLLSLNEK 606
           D +  A+Y  ++  +  +IA L+AKHQ R+ +D+EFG+I QDIA+Y+   D+  +SL E 
Sbjct: 554 DKVPVAQYSTVDAISAPLIAELDAKHQGRIKSDVEFGYIYQDIAEYKKHHDEKSVSLVES 613

Query: 607 VRKEESAKADEERLARINQRQKALGKSTYASLQDIPKDYEAPDAYLDESVNIMLDMI 663
            R  E    D+++L R N+R+   G    ASL DI KD EAPD  LDE+  I LD++
Sbjct: 614 ERIAEREADDKKQLDRTNERRTRAGLDKVASLDDIEKDIEAPDPLLDETAYITLDLV 670