Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., C-terminal processing peptidase (RefSeq) from Shewanella amazonensis SB2B

 Score =  114 bits (285), Expect = 8e-30
 Identities = 103/355 (29%), Positives = 169/355 (47%), Gaps = 31/355 (8%)

Query: 187 EIKETLDKRYNNAIKRLTQTKSEDVFQTYMNAFAREVDPHTSYLSPRNAEQFQSEMNLSL 246
           +I +T++  Y N I R      +++ +  +    +++DP++ YLS ++    +       
Sbjct: 43  DIMDTIETYYVNQISR------DELIEGAIEGMFKKLDPYSGYLSHQDLINIRDTNRGEY 96

Query: 247 EGIGAVLQMTDDYTIIRSLVAGGPAALSKQLGEGDRIIGVGQEGEDVVDVVGWRLDDVVQ 306
            G G  +   D+   I S  +  PA  +  +  GD II V         V    L+ V+ 
Sbjct: 97  FGYGFEIASDDNLIRIVSPFSDSPADKAGIIA-GDTIIAVNSH-----QVADMDLNAVLA 150

Query: 307 LIKGPKGSKVKLLVLPEGKDAKSHVVTIVRDKIRLEDRAVKSEVIEKAGKKIGVLEVPSF 366
            I+    + + L +  E  D  S+ VT+    I +   +V+   +E    +I  + + SF
Sbjct: 151 EIRYHSLNNLPLTLTLEHSDKISYQVTLRPATISVA--SVQGRWLEG---EIAYVRLTSF 205

Query: 367 YVGLAQDTEKLLAELKAKKVDGIIVDLRNNGGGALTEATALSGLFITSGPVVQVRDSYGR 426
                +D  K L++  + K  G+I+DLRNN GG L +A  ++ LF+  G +V     Y  
Sbjct: 206 QDNTTEDLVKQLSQWNSPK--GLILDLRNNPGGLLDQAIRIADLFLAKGRIVSTSGRY-- 261

Query: 427 VNVNSDTDGS---ISYSGPMTVLINRYSASASEIFAAAMQDYGRAIILGENSFGKGTVQQ 483
            + NSD   S   +  + PM VLIN+ SASASE+ AAA+Q+ GRA+++GE SFGKGTVQ 
Sbjct: 262 FDANSDYFASPQTLMTNVPMMVLINKGSASASEVLAAALQENGRALLIGETSFGKGTVQ- 320

Query: 484 HRSLNHIYDLFDKELGYVQYTIQKFYRIDGGSTQNKGVVPDIAYPTAIAPSETGE 538
             SL    ++       ++ TI  +    G     KG+ PDI         + G+
Sbjct: 321 --SLIPTLNMDSA----IKLTIAHYNTPKGHDIHAKGIEPDIKIAAQNTVKDAGD 369