Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., C-terminal processing peptidase (NCBI) from Rhodospirillum rubrum S1H

 Score =  113 bits (282), Expect = 3e-29
 Identities = 99/352 (28%), Positives = 162/352 (46%), Gaps = 32/352 (9%)

Query: 203 LTQTKSEDVFQTYMNAFAREVDPHTSYLSPRNAEQFQSEMNLSLEGIGAVLQMTDDYTII 262
           L  +  E+++Q    +    +DP + Y S  +AE  + + N    GIG +  +      I
Sbjct: 166 LNASDPEEIYQAIFTSALGGLDPFSRYASRDDAEVNRGQRN-GFGGIGVMYDVGGRGATI 224

Query: 263 RSLVAGGPAALSKQLGEGDRIIGVGQEGEDVVDVVGWRLDDVVQLIKGPKGSKVKLLVLP 322
             ++ G PAA   +L  GD I+ V  +        G    D+ + ++GP  S+V L  L 
Sbjct: 225 TQVMPGTPAA-DARLRLGDVIVAVNGQSTR-----GATRHDLREWLRGPTSSEVTL-TLV 277

Query: 323 EGKDAKSHVVTIVRDKIRLEDRAVKSEVIEKAGKKIGVLEVPSFYVGLAQDTEKLLAELK 382
                    +T+ R  I      +   V     + +G + V SF  G      + + E +
Sbjct: 278 SADTPTERTLTLTRALI------IMPTVDLHLDEGVGFITVSSFNQGTTTRVAEAIGEAR 331

Query: 383 AK---KVDGIIVDLRNNGGGALTEATALSGLFITSGPVVQVRDSYGRVN-VNSDTDGSIS 438
            +    + G+++DLR N GG L +A  +S LF+ +GP+V  R          + + G I+
Sbjct: 332 RQLGADLRGLVIDLRGNPGGLLDQAVTMSDLFLDTGPIVSTRGRNPDARQFYASSGGDIA 391

Query: 439 YSGPMTVLINRYSASASEIFAAAMQDYGRAIILGENSFGKGTVQQHRSLNHIYDLFDKEL 498
            + P+  LI+  SASA+EI AAA+QD GRA+++G +SFGKGTVQ    L           
Sbjct: 392 QNLPIVALIDGDSASAAEIVAAALQDNGRAVVIGTSSFGKGTVQTLIQL--------PNG 443

Query: 499 GYVQYTIQKFYRIDGGSTQNKGVVPDIAYPTAIAPSETGESVEDNALPWDSI 550
           G +  T  +F+   G      GV+P +A  + IA     E+  ++  P D +
Sbjct: 444 GELTLTWSRFHSPSGYVLHGLGVLP-VACTSGIA-----EASREDGAPADKV 489