Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., C-terminal processing peptidase S41A (NCBI) from Rhodospirillum rubrum S1H

 Score =  142 bits (357), Expect = 4e-38
 Identities = 105/323 (32%), Positives = 169/323 (52%), Gaps = 30/323 (9%)

Query: 209 EDVFQTYMNAFAREVDPHTSYLSPRNAEQFQSEMNLSLEGIGAVLQMTDDYTIIRSLVAG 268
           + + +  +N     +DPH+SYL+ ++ E  Q +      G+G  +   D +  + S +  
Sbjct: 61  DQLIEAAINGMLTSLDPHSSYLNAKHFEDMQVQTKGEFGGLGIEVTQEDGFIKVVSPIDE 120

Query: 269 GPAALSKQLGEGDRIIGVGQEGEDVVDVVGWRLDDVVQLIKGPKGSKVKLLVLPEGKDAK 328
            PAAL+  L  GD I  +  E      V+G  L D V+ ++GP G +++L +   GK+  
Sbjct: 121 TPAALAG-LQPGDFITHLDGES-----VLGLSLADAVEKMRGPVGKEIRLTIQRVGKEPF 174

Query: 329 SHVVTIVRDKIRLEDRAVKSEVIEKAGKKIGVLEVPSFYVGLAQDTEKLLAELKAK---K 385
              VT+ RD I+++  +VKS +       +G + + SF     +   + L +L++K    
Sbjct: 175 D--VTLKRDTIKIQ--SVKSRM----EGDVGYVRITSFSEQTEKSLREALDDLRSKGGDS 226

Query: 386 VDGIIVDLRNNGGGALTEATALSGLFITSGPVV--QVRDSYGRVNVNSDTDGSISYSGPM 443
           + G ++DLRNN GG L +A A+S +F+  G +V  + RD+      N+   G ++   P+
Sbjct: 227 IKGYVLDLRNNPGGLLEQAIAVSDVFLDKGEIVSTRARDAKDTQRFNA-RPGDLTKGMPV 285

Query: 444 TVLINRYSASASEIFAAAMQDYGRAIILGENSFGKGTVQQHRSL-NHIYDLFDKELGYVQ 502
            VLIN  SASASEI A A+QD+ RA+I+G  SFGKG+VQ    L  H         G ++
Sbjct: 286 VVLINSGSASASEIVAGALQDHHRALIVGTKSFGKGSVQTIMPLPGH---------GAMR 336

Query: 503 YTIQKFYRIDGGSTQNKGVVPDI 525
            T  ++Y   G S Q  G+ PDI
Sbjct: 337 LTTARYYTPSGRSIQALGIDPDI 359