Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., carboxyl-terminal protease (RefSeq) from Shewanella loihica PV-4

 Score =  115 bits (287), Expect = 5e-30
 Identities = 94/322 (29%), Positives = 155/322 (48%), Gaps = 20/322 (6%)

Query: 209 EDVFQTYMNAFAREVDPHTSYLSPRNAEQFQSEMNLSLEGIGAVLQMTDDYTIIRSLVAG 268
           ED+ Q  +     ++DP++++L  +     +        G G  +    +   I S    
Sbjct: 59  EDLIQAAIEGVFSKLDPYSNFLDSQAFSDIKDANKGEYFGFGIEIATEQNQVTIISPFPH 118

Query: 269 GPAALSKQLGEGDRIIGVGQEGEDVVDVVGWRLDDVVQLIKGPKGSKVKL-LVLPEGKDA 327
            PAA +  +  GDRI+ V  E      V   +L++V++ IK      + + L L      
Sbjct: 119 SPAA-NAGIQPGDRIVKVNNEA-----VTAKQLENVLEEIKFHSQHNLAINLSLSRANSE 172

Query: 328 KSHVVTIVRDKIRLEDRAVKSEVIEKAGKKIGVLEVPSFYVGLAQDTEKLLAELKAKKVD 387
               VT+    I +   +V+ E+++     IG +++ SF     +D  KLL + + + + 
Sbjct: 173 ALFDVTLTPSLIDVN--SVEGELLDNG---IGYIKLSSFQDDSTEDLIKLLTQWQNEPMT 227

Query: 388 GIIVDLRNNGGGALTEATALSGLFITSGPVVQVRDSYGRVNVNSDTDGSISYSG-PMTVL 446
           G+I+DLRNN GG L +A  ++ +F+  G ++  R  +   N +        +S  P+TVL
Sbjct: 228 GLILDLRNNPGGLLDQAIKIADIFLAKGRIISTRGRFFDANSDYFASPQTMFSKLPLTVL 287

Query: 447 INRYSASASEIFAAAMQDYGRAIILGENSFGKGTVQQHRSLNHIYDLFDKELGYVQYTIQ 506
           IN+ SASASE+ AAA+Q+  RA ++GE SFGKGTVQ     + I  L   E   ++ TI 
Sbjct: 288 INKGSASASEVLAAALQENKRATLIGEKSFGKGTVQ-----SLIPTLI--EGNAIKLTIA 340

Query: 507 KFYRIDGGSTQNKGVVPDIAYP 528
            +    G      G+ PDI  P
Sbjct: 341 HYTTPKGRDIHAIGIEPDINIP 362