Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., carboxy-terminal protease (RefSeq) from Shewanella loihica PV-4

 Score =  797 bits (2058), Expect = 0.0
 Identities = 400/669 (59%), Positives = 518/669 (77%), Gaps = 12/669 (1%)

Query: 6   KISLIA--ASLWLAAFSAQALEAKLKPEDLPLLVPEAQHATAAKRVTSRFTRSHYKQFNL 63
           K++L A  AS+++  FSA AL   +   +LP L  E QH  A+KRVT  FTR+HY +F+L
Sbjct: 3   KLTLAASIASIFVG-FSAWALTPSIPSSELPSLTQEPQHKVASKRVTGLFTRAHYHRFDL 61

Query: 64  DDQFSQAMFERYLEMLDYSRNIFTQADIDSFKAWSLQLDDQLKAGDNQIAYDLYNLSMEK 123
           DD FS+ +F+RYL+ LDY RN+  Q+DIDSFK ++ Q DD LK+GD   AY +++L  ++
Sbjct: 62  DDAFSEQVFDRYLKQLDYRRNVLLQSDIDSFKPYATQFDDMLKSGDLTAAYKMFDLVQQR 121

Query: 124 RFERFQYALSLLDQEMTFDAD-ESIELDRTKSPWPKDLKEINELWRQRVKYDALSLKLAG 182
           R++RF YALSLLD+EM F+   +S + DR  + WPKD  E+NELWRQRVKYDAL+LKL G
Sbjct: 122 RYDRFAYALSLLDKEMDFNVPGDSYQYDRDDAAWPKDEAELNELWRQRVKYDALNLKLTG 181

Query: 183 KEWPEIKETLDKRYNNAIKRLTQTKSEDVFQTYMNAFAREVDPHTSYLSPRNAEQFQSEM 242
           K W EI + LDKRYNNAIKRL+QTKSEDVFQ  MNAF+R V+PHTSYLSPRNAE+FQ EM
Sbjct: 182 KNWDEIVKVLDKRYNNAIKRLSQTKSEDVFQGVMNAFSRSVEPHTSYLSPRNAERFQMEM 241

Query: 243 NLSLEGIGAVLQMTDDYTIIRSLVAGGPAALSKQLGEGDRIIGVGQEGEDVVDVVGWRLD 302
           NLSLEGIGAVLQM DDYT+I+SLVAGGPAA S++L   DRI+GVGQEG+++VDV+GWRLD
Sbjct: 242 NLSLEGIGAVLQMDDDYTVIKSLVAGGPAANSEKLAPEDRIVGVGQEGKEIVDVIGWRLD 301

Query: 303 DVVQLIKGPKGSKVKLLVLPE--GKDAKSHVVTIVRDKIRLEDRAVKSEVIEK-----AG 355
           DVV+LIKGPKGSKV L +LP+  G  AK   VTIVRDKIRLEDRA  SEVIE      AG
Sbjct: 302 DVVELIKGPKGSKVVLQILPKKGGSSAKPIDVTIVRDKIRLEDRAATSEVIEPETGDYAG 361

Query: 356 KKIGVLEVPSFYVGLAQDTEKLLAELKAKKVDGIIVDLRNNGGGALTEATALSGLFITSG 415
           +K+GV+++P FY+ L+QD  K L +LK  KV+G+++DLR NGGGALTEAT L+GLFI  G
Sbjct: 362 RKVGVIKIPGFYMNLSQDVTKELVKLKDAKVEGVVIDLRGNGGGALTEATLLTGLFIEQG 421

Query: 416 PVVQVRDSYGRVNVNSDTDGSISYSGPMTVLINRYSASASEIFAAAMQDYGRAIILGENS 475
           PVVQ+RD+ G+V+ N D DG ++YSGP+TV+++RYSASASEIFAAA+QDY RA+I+GE++
Sbjct: 422 PVVQIRDANGKVSQNRDNDGRVTYSGPLTVMVDRYSASASEIFAAALQDYDRALIVGEST 481

Query: 476 FGKGTVQQHRSLNHIYDLFDKELGYVQYTIQKFYRIDGGSTQNKGVVPDIAYPTAIAPSE 535
           FGKGTVQQH+SL  IYD++DK +G+VQYTI KFYRI+GGSTQ KGV PDI +P+A+ P E
Sbjct: 482 FGKGTVQQHKSLGRIYDMYDKPIGHVQYTIAKFYRINGGSTQLKGVTPDIPFPSALEPGE 541

Query: 536 TGESVEDNALPWDSIDKAKYERLNNFN-TIIASLEAKHQQRVANDLEFGFIEQDIAKYRA 594
            GE+ E NALPWD +  A+Y  L +    ++ +L+++HQQR+  D+EFG+I+QDIA+++ 
Sbjct: 542 YGEAEEANALPWDKVPVAQYGTLGDITPELVTNLDSRHQQRIKKDVEFGYIDQDIAEFKK 601

Query: 595 EKDDNLLSLNEKVRKEESAKADEERLARINQRQKALGKSTYASLQDIPKDYEAPDAYLDE 654
              +  +SL EK R  E    DE++LAR+N+R+   G     SL D  +D +APDA+LDE
Sbjct: 602 SHKETSVSLVEKERVAEREANDEKQLARLNERRAVDGLEALKSLDDAEEDVKAPDAFLDE 661

Query: 655 SVNIMLDMI 663
           +V I LD++
Sbjct: 662 TVYITLDLV 670