Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., carboxyl-terminal protease (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  135 bits (340), Expect = 4e-36
 Identities = 115/369 (31%), Positives = 184/369 (49%), Gaps = 41/369 (11%)

Query: 172 KYDALSLKLAGKEWPEIKETLDKRYNNAIKRLTQTKSEDVFQTYMNAFAREVDPHTSYLS 231
           KYD+L      K + ++ + +++ Y   + R      +D+    +    + +DPH+++LS
Sbjct: 37  KYDSL------KRFSQVLDLVERYYVRDVPR------KDLINGAVKGMLQGLDPHSTFLS 84

Query: 232 PRNAEQFQSEMNLSLEGIGAVLQMTDDYTIIRSLVAGGPAALSKQLGEGDRIIGVGQEGE 291
               ++ Q   +    GIG  +   +   I+ + +   PA  +  L  GD I+ V     
Sbjct: 85  VEEFKEMQESTSGEFFGIGIEISSENGQLIVVAPIEDTPAHKAG-LKSGDIILAV----- 138

Query: 292 DVVDVVGWRLDDVVQLIKGPKGSKVKLLVLPEGKDAKS-HVVTIVRDKIRLEDRAVKSEV 350
           D V        + V  I+G KG++V+L +L   +DAK+  VV +VRD I L   +VKS++
Sbjct: 139 DGVPTQDMTTQEAVTRIRGAKGTEVELSILH--RDAKAPEVVRLVRDAIPLI--SVKSKM 194

Query: 351 IEKAGKKIGVLEVPSFYVGLAQDTEKLLAELKAKKVDGIIVDLRNNGGGALTEATALSGL 410
           +E     + +        G   D    L E   K + GII+DLRNN GG L +A ++S  
Sbjct: 195 LEDGYHWVRLTRFSERTTGELVDA---LKEANKKGMKGIILDLRNNPGGLLDQAVSVSDT 251

Query: 411 FITSGPVVQVRDSYGRVNVNSDTDGSISYSG----PMTVLINRYSASASEIFAAAMQDYG 466
           F+  G +V +R   GR+   S    + +  G    PM VL+N  SASASEI A A++D+ 
Sbjct: 252 FLKDGVIVSIR---GRMEDASREYRAKAQPGDVTVPMVVLVNAGSASASEIVAGALRDHN 308

Query: 467 RAIILGENSFGKGTVQQHRSLNHIYDLFDKELGYVQYTIQKFYRIDGGSTQNKGVVPDIA 526
           RA+ILGE +FGKG+VQ      ++  L D     ++ T+  +Y  +G S Q +GV PD  
Sbjct: 309 RALILGERTFGKGSVQ------NVIPLSDG--AGLKLTVALYYTPNGRSIQAEGVEPDFE 360

Query: 527 YPTAIAPSE 535
            P  +   E
Sbjct: 361 VPFELPREE 369