Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., carboxyl-terminal protease, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  110 bits (274), Expect = 2e-28
 Identities = 102/360 (28%), Positives = 172/360 (47%), Gaps = 32/360 (8%)

Query: 184 EWPEIKETLDKRYNNAIKRLTQTKSEDVFQTYMNAFAREVDPHTSYLSPRNAEQFQSEMN 243
           ++P +++ L+      +K +T+   +++ Q  +      +DP++S+L+ +     +    
Sbjct: 37  DYPLLQDVLETVETYYVKTVTK---DELVQAAIKGIFEHLDPYSSFLNHQELLDLKDSNR 93

Query: 244 LSLEGIGAVLQMTDDYTIIRSLVAGGPAALSKQLGEGDRIIGVGQEGEDVVDVVGWRLDD 303
               G G  +    D+  I +  A  PA  +  +  GD II +              L D
Sbjct: 94  GEYFGFGFEVASEKDHISIIAPFANSPAEQAG-IQAGDIIIKLNN-----TPTTETNLAD 147

Query: 304 VVQLIKGPKGSKVKL-LVLPEGKDAKSHVVTIVRDKIRLEDRAVKSEVIEKAGKKIGVLE 362
           ++  IK    S   + L L    D     V +    I ++  +V S++++     IG + 
Sbjct: 148 ILNQIKQHSLSHQSIRLTLKHRNDEAEFEVMLKPSTITIQ--SVASKLLDG---NIGYVR 202

Query: 363 VPSFYVGLAQDTEKLLAELKAKKVDGIIVDLRNNGGGALTEATALSGLFITSGPVVQVRD 422
           + SF     +D  + L++ +  ++ G+I+DLRNN GG L +A  ++ LF+  G +V    
Sbjct: 203 LSSFQEDSTEDMVRTLSQWQGTQLTGLILDLRNNPGGLLDQAINIADLFLAKGRIVSTSG 262

Query: 423 SYGRVNVNSDTDGS---ISYSGPMTVLINRYSASASEIFAAAMQDYGRAIILGENSFGKG 479
            +   + NSD   S   +  + PM VLIN+ SASASE+ AAA+Q+ GRA +LGE SFGKG
Sbjct: 263 RF--FDANSDYYASPQTMLANVPMLVLINKGSASASEVLAAALQENGRAKLLGETSFGKG 320

Query: 480 TVQQHRSLNHIYDLFDKELGYVQYTIQKFYRIDGGSTQNKGVVPDIAYPTAIAPSETGES 539
           TVQ   SL  I +        V+ TI ++    G +  + G+ PDI        SETG +
Sbjct: 321 TVQ---SLIPILN----NGNAVKLTIAQYNTPKGENIHDIGIKPDIK-----VVSETGSN 368