Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., carboxyl-terminal protease (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  142 bits (359), Expect = 2e-38
 Identities = 134/448 (29%), Positives = 215/448 (47%), Gaps = 58/448 (12%)

Query: 172 KYDALSLKLAGKEWPEIKETLDKRYNNAIKRLTQTKSEDVFQTYMNAFAREVDPHTSYLS 231
           KYDAL      K + ++ + +++ Y   + R      +D+    +    + +DPH+++LS
Sbjct: 31  KYDAL------KRFSQVLDIVERYYVRDVPR------KDLMNGAVKGMLQGLDPHSTFLS 78

Query: 232 PRNAEQFQSEMNLSLEGIGAVLQMTDDYTIIRSLVAGGPAALSKQLGEGDRIIGV-GQEG 290
           P   ++ Q   +    GIG  +   +    + S +   PA     L  GD I+ V GQ  
Sbjct: 79  PEEFKEMQETTSGEFFGIGIEISSENGQLTVVSPIEDTPA-FKAGLKAGDLILAVDGQPT 137

Query: 291 EDVVDVVGWRLDDVVQLIKGPKGSKVKLLVLPEGKDAKSHVVTIVRDKIRLEDRAVKSEV 350
           +++         + V  I+GPKGS+V+LL+L     A S  V IVRD I L   +VKS+ 
Sbjct: 138 QEM------STQEAVSRIRGPKGSEVELLILHREAKAPS-TVKIVRDAIPLV--SVKSKQ 188

Query: 351 IEKAGKKIGVLEVPSFYVGLAQDTEKLLAEL-KAKKVDGIIVDLRNNGGGALTEATALSG 409
           +E+    +    +  F      D  + L E  K   V G+++DLRNN GG L +A ++S 
Sbjct: 189 LEQGYVWV---RLTRFSERTTSDLLEALREANKRGPVKGVVLDLRNNPGGLLDQAVSVSD 245

Query: 410 LFITSGPVVQVR---DSYGRVNVNSDTDGSISYSGPMTVLINRYSASASEIFAAAMQDYG 466
           +F+  G +V +R   D  GR   N+    S   + PM VLIN  SASASEI A A++D  
Sbjct: 246 VFLRDGGIVSIRGRGDDTGR-EYNAKAQ-STDVTAPMVVLINAGSASASEIVAGALRDQK 303

Query: 467 RAIILGENSFGKGTVQQHRSLNHIYDLFDKELGYVQYTIQKFYRIDGGSTQNKGVVPDIA 526
           RA+++GE SFGKG+VQ      ++  L D     ++ T+  +Y  +G S Q +G+ PDI 
Sbjct: 304 RALLVGERSFGKGSVQ------NVIPLSDG--AGLKLTVALYYTPNGRSIQAEGIDPDIE 355

Query: 527 YPTAIAPSETGESVEDNALPWDSIDKAKYERLNNFNTIIASLEAKHQQRVANDLEFGFIE 586
            P   AP       ED+A P           +  FN +     ++H +  A   +    +
Sbjct: 356 IPFE-APR------EDDAKP-----------MQRFNMLREKDLSRHLENGAGGKQGKNDQ 397

Query: 587 QDIAKYRAEKDDNLLSLNEKVRKEESAK 614
            D  +   E+D+ L    + V++  + K
Sbjct: 398 SDEVRDLLERDNQLRMALQFVKRLPALK 425