Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 683 a.a., carboxy-terminal protease (RefSeq) from Shewanella sp. ANA-3

 Score =  769 bits (1985), Expect = 0.0
 Identities = 390/656 (59%), Positives = 500/656 (76%), Gaps = 13/656 (1%)

Query: 19  FSAQALEAKLKPEDLPLLVPEAQHATAAKRVTSRFTRSHYKQFNLDDQFSQAMFERYLEM 78
           FSA A+   ++  +LP L  EAQH  A+KRVT  +TRSHY +F LDD FS  +F+RYL+ 
Sbjct: 17  FSAWAVPPTIQISELPTLKQEAQHKVASKRVTDLYTRSHYHRFALDDAFSAQIFDRYLQQ 76

Query: 79  LDYSRNIFTQADIDSFKAWSLQLDDQLKAGDNQIAYDLYNLSMEKRFERFQYALSLLDQE 138
           LDY RN+ TQAD+DSFK ++ Q DD L +GD   AY +++L  ++R+E F YALSLLD+E
Sbjct: 77  LDYRRNVLTQADVDSFKPYTNQFDDMLSSGDLDPAYKMFDLVQKRRYEGFVYALSLLDKE 136

Query: 139 MTFDAD-ESIELDRTKSPWPKDLKEINELWRQRVKYDALSLKLAGKEWPEIKETLDKRYN 197
           M F    ++ E DR  + WPKD  EINELWRQRVKYDAL+LKL GK+WPEI + L KRYN
Sbjct: 137 MDFTVPGDAYEYDREDAAWPKDQAEINELWRQRVKYDALNLKLTGKKWPEIVDILQKRYN 196

Query: 198 NAIKRLTQTKSEDVFQTYMNAFAREVDPHTSYLSPRNAEQFQSEMNLSLEGIGAVLQMTD 257
           NAIKRLTQT SEDVFQ  MNAF+R ++PHTSYLSPRNAE+FQ EMNLSLEGIGA LQ+ D
Sbjct: 197 NAIKRLTQTNSEDVFQAVMNAFSRSIEPHTSYLSPRNAERFQMEMNLSLEGIGAQLQLED 256

Query: 258 DYTIIRSLVAGGPAALSKQLGEGDRIIGVGQEGEDVVDVVGWRLDDVVQLIKGPKGSKVK 317
           DYT+I+SL+AGGPAA S++L   D+I+GVGQEG ++VDV+GWRLDDVV LIKGPKGSKV 
Sbjct: 257 DYTVIKSLIAGGPAASSEKLSPEDKIVGVGQEGGEIVDVIGWRLDDVVDLIKGPKGSKVI 316

Query: 318 LLVLPE--GKDAKSHVVTIVRDKIRLEDRAVKSEVIEK-----AGKKIGVLEVPSFYVGL 370
           L +LP+  G +AK   +T+VRDKIRLEDRA  S++IE      A +K+GV+++P FY+ L
Sbjct: 317 LQILPKKGGSNAKPFNLTLVRDKIRLEDRAATSKIIEPKDGEYANRKVGVIQIPGFYMNL 376

Query: 371 AQDTEKLLAELKAKKVDGIIVDLRNNGGGALTEATALSGLFITSGPVVQVRDSYGRVNVN 430
           +QD EK L +L   KV+G+++DLR NGGGALTEA  L+GLFI  GPVVQVRD+ GRV+ +
Sbjct: 377 SQDVEKELVKLNEAKVEGVVIDLRGNGGGALTEAVLLTGLFIDMGPVVQVRDADGRVSAH 436

Query: 431 SDTDGSISYSGPMTVLINRYSASASEIFAAAMQDYGRAIILGENSFGKGTVQQHRSLNHI 490
            D DG  +Y+GP+T++++RYSASASEIFAAA+QDY RA+I+GE+SFGKGTVQQH+SL  I
Sbjct: 437 RDNDGKTTYAGPLTIMVDRYSASASEIFAAALQDYDRALIVGESSFGKGTVQQHKSLGRI 496

Query: 491 YDLFDKELGYVQYTIQKFYRIDGGSTQNKGVVPDIAYPTAIAPSETGESVEDNALPWDSI 550
           YD+++K +G+VQYTIQKFYRI+GGSTQ KGV P+IAYP+A+ P E GE+ E NALPWD +
Sbjct: 497 YDMYEKPIGHVQYTIQKFYRINGGSTQLKGVTPNIAYPSALEPGEYGEAEEKNALPWDKV 556

Query: 551 DKAKYERLNNFN-TIIASLEAKHQQRVANDLEFGFIEQDIAKYRAEKDDNLLSLNEKVRK 609
             A+Y  LN+    ++ASLE KH  R+ ND+EF +I QDIA ++    +  +SL E  R 
Sbjct: 557 PMAQYGTLNDITPELVASLEKKHLARIQNDVEFNYINQDIADFKKHHKEKTVSLVESER- 615

Query: 610 EESAKADEER-LARINQRQKALGKSTYASLQDI--PKDYEAPDAYLDESVNIMLDM 662
             S +ADE++ L R N+R+ A G +   S++DI    D EAPDA+LDE+  I LDM
Sbjct: 616 IASREADEKKVLDRTNERRVAHGLAAVKSMEDIKDKDDVEAPDAFLDETAYITLDM 671