Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., C-terminal processing peptidase-3 (RefSeq) from Shewanella sp. ANA-3

 Score =  112 bits (280), Expect = 3e-29
 Identities = 102/363 (28%), Positives = 174/363 (47%), Gaps = 35/363 (9%)

Query: 187 EIKETLDKRYNNAIKRLTQTKSEDVFQTYMNAFAREVDPHTSYLSPRNAEQFQSEMNLSL 246
           ++ ET++  Y   + +      +++ Q  +      +DP++S+L+ +     +       
Sbjct: 43  DVLETVETYYVKTVSK------DELVQAAIKGIFEHLDPYSSFLNHQELLDLKDSNRGEY 96

Query: 247 EGIGAVLQMTDDYTIIRSLVAGGPAALSKQLGEGDRIIGVGQEGEDVVDVVGWRLDDVVQ 306
            G G  +    D+  I +  A  PA  +  +  GD II +              L D++ 
Sbjct: 97  FGFGFEVASDKDHISIIAPFANSPAEQAG-IQAGDIIIKLND-----TPTTETNLADILN 150

Query: 307 LIKGPKGSKVKL-LVLPEGKDAKSHVVTIVRDKIRLEDRAVKSEVIEKAGKKIGVLEVPS 365
            IK    S   + L L    D     V++    I ++  +V S++++     IG + + S
Sbjct: 151 QIKQHSLSNQSIHLTLKHHNDDAQFEVSLKPSTITIQ--SVTSKLLDG---NIGYVRLSS 205

Query: 366 FYVGLAQDTEKLLAELKAKKVDGIIVDLRNNGGGALTEATALSGLFITSGPVVQVRDSYG 425
           F     +D  + L++ +   + G+I+DLRNN GG L +A  ++ LF+  G +V     + 
Sbjct: 206 FQENSTEDMVRSLSQWQNAHLTGLILDLRNNPGGLLDQAIKIADLFLAKGRIVSTSGRF- 264

Query: 426 RVNVNSDTDGS---ISYSGPMTVLINRYSASASEIFAAAMQDYGRAIILGENSFGKGTVQ 482
             + NSD   S   +  + PM VLIN+ SASASE+ AAA+Q+ GRA +LGE SFGKGTVQ
Sbjct: 265 -FDANSDYYASPQTMLTNVPMLVLINKGSASASEVLAAALQENGRAKLLGETSFGKGTVQ 323

Query: 483 QHRSLNHIYDLFDKELGYVQYTIQKFYRIDGGSTQNKGVVPDIAYPTAIAPSETGESVED 542
              SL  I +    +   ++ TI ++    G +  + G+VPDI   T     ETG + ++
Sbjct: 324 ---SLIPILN----DGNAIKLTIAQYNTPRGENIHDIGIVPDIKVAT-----ETGSNQKN 371

Query: 543 NAL 545
            A+
Sbjct: 372 MAI 374