Pairwise Alignments
Query, 1613 a.a., NAD-glutamate dehydrogenase from Vibrio cholerae E7946 ATCC 55056
Subject, 1614 a.a., NAD-glutamate dehydrogenase (RefSeq) from Shewanella loihica PV-4
Score = 1859 bits (4815), Expect = 0.0
Identities = 925/1617 (57%), Positives = 1198/1617 (74%), Gaps = 15/1617 (0%)
Query: 1 MTARETLMPVLLEKVYQLIQDKLELAQQPLVTQLGQHLFSNISQDDLVERNESDLYGAVL 60
M ++ + VLLE V LI K+ Q V Q +++++S+DDL RN+SDLYGAVL
Sbjct: 1 MALKDAMPSVLLENVVSLIHSKVPNTQAKQVEQFATCIYAHMSKDDLQHRNDSDLYGAVL 60
Query: 61 SLWHHINEKKADERSVRVFNPTVSRQGWQSTHTIVEIVLPDSPFLVDSIKMALSRLGLAS 120
SLW+ N+ E +RVFNP+ S+ GW+S+H+I+E++ PD PFLVDS+ MAL+R+G+ +
Sbjct: 61 SLWNAANKTPVGETHIRVFNPSQSKHGWKSSHSIIEVIQPDMPFLVDSVGMALNRMGITT 120
Query: 121 HLMLNGPAHIARHDDGSIKSINQGEGQLTS-----MFHIEVDRLSSKEEMTELKNELLDI 175
H+ML+ P + R D G I ++ + + S +F IEVDRLSS ++ L+ E+ +
Sbjct: 121 HMMLHTPLTVKR-DQGVITGVSYNDDKDESNDKVAVFLIEVDRLSSDADIKSLEKEIQSV 179
Query: 176 LHDTALVVKDWKPMATKLEQVINQLEADKKQIPVEAERLQETIQFLRWLGNHNFTFMGYK 235
L D A V DW+ M+ KL + I +L + + P E L E I FL +L NH+FT +GY+
Sbjct: 180 LGDVAASVNDWQAMSNKLSETIAELPS--RPFPGEKRELDEAINFLTYLNNHHFTLLGYR 237
Query: 236 EFDLVEKNGDTELTPTKDTGLGLFSDNERVRSVK---LSQFPDSARLEAKKPFLLILTKG 292
+DL + GD EL P +T LGL + + +S K LS D+AR EA LLILTK
Sbjct: 238 RYDLHKVEGDLELLPANETSLGLMNVPGKPKSSKGLMLSSLSDTARKEALDSSLLILTKS 297
Query: 293 NKQSRIHRPAYTDYIGIKKFDAKGKVIGEHRFTGLYTSAVYNQSVEGIPLIREKVGRILA 352
++SR+HRPAY DYIGIK+FD +G VIGE RF GLY S +YN+S IPL+ EK+ R+L
Sbjct: 298 TEKSRVHRPAYVDYIGIKRFDEQGNVIGEDRFIGLYASNLYNRSPREIPLLAEKIQRVLD 357
Query: 353 ASGYRQGSYAYKALHNILENYPRDELLQAREEELLEVGMGVVQMQDRDLLRLFVRKDPFG 412
SG S+ YKAL +ILE PRDE++QARE EL + GV++MQDRD L+LFVRKD FG
Sbjct: 358 DSGLTPHSHDYKALMHILETLPRDEIVQARESELASMAHGVLEMQDRDKLKLFVRKDGFG 417
Query: 413 RFFSCMVYVTKERYNTELRRKTQQVFKQYFGCEQDVEFTTYFSESPLARTHYIVRVDNNN 472
RF SC+VYV+K+RYNT+LR TQ++ Q+F ++DVEFTTYFSES LARTHYIV+VDNN
Sbjct: 418 RFLSCLVYVSKDRYNTKLREDTQRILAQHFNTKEDVEFTTYFSESTLARTHYIVKVDNNI 477
Query: 473 INVDVKKIEQNLMEASTSWDDRLAEAIVANFGESRGLPLSKEYQRAFPRSYKEDVMPGSA 532
+VDV IE NL+EA+ SW+D+L A++ GE G L K Y AFPRSYKEDV+P SA
Sbjct: 478 TDVDVAAIENNLIEAARSWEDKLNTALITAQGEESGNRLVKRYVNAFPRSYKEDVLPSSA 537
Query: 533 LADIEHLEALDEHNKLGMLFYRLQETAKDSKAVRLKLYHKDEPIHLSDVMPMLENLGLRV 592
+ DIEHLEALD+ +KLGMLFY+ QETA VRLKL+HKDEPIHLSDV+PMLEN GLRV
Sbjct: 538 VVDIEHLEALDDDHKLGMLFYQPQETALKDNKVRLKLFHKDEPIHLSDVLPMLENFGLRV 597
Query: 593 IGESPYEVVKANGQVYWILDFSMLHKSDKQVDLREARDRFQQAFAAIWAGELESDGFNRL 652
I E PYEV+ A+G +WILDF M + +L +++DRFQ A + +W ELE DGFNRL
Sbjct: 598 INERPYEVMTADGSTFWILDFLMTVQGAAVDNLADSQDRFQTALSQVWRKELEDDGFNRL 657
Query: 653 ILGASLSGREVSILRAYARYMRQVGFPFSQHYIEDTLSHHPDLAQGLVDLFVRRFDPKYK 712
+L LSGREVS+LRAYA+YMRQ+ FSQ YIE+T S +P +A LV +F+R+F+PK K
Sbjct: 658 VLATGLSGREVSVLRAYAKYMRQIDATFSQAYIEETFSSYPQIADLLVKMFIRKFNPKLK 717
Query: 713 GGEKGQAEIIKSLTEQLDQVQSLDDDRIIRRYMEMINATLRTNYYQLDEHKQNKPWLSLK 772
+ A+ ++ + +L+ V SLDDDRIIRRY+++INATLRTN+YQ+ NKP++S K
Sbjct: 718 --TRTLAKFVEQIDMRLEDVSSLDDDRIIRRYLDLINATLRTNFYQVLPDGSNKPYVSFK 775
Query: 773 MKPSEIPEIPAPVPAFEIFVYAPDIEGVHLRGGKVARGGLRWSDRQEDFRTEILGLVKAQ 832
P EIPE+P P+P FEIFVY+P +EGVHLRGGKVARGGLRWSDR+EDFRTE+LGLVKAQ
Sbjct: 776 FSPEEIPEMPRPLPKFEIFVYSPRVEGVHLRGGKVARGGLRWSDRREDFRTEVLGLVKAQ 835
Query: 833 QVKNTVIVPVGAKGGFVCKKQYLYTTRDEIFAEGQRCYKRFIRALLDVTDNIIEGQVVPP 892
QVKNTVIVPVGAKGGFVCK+ RD F EGQ CY+ FIR LLD++DNI+EG++VPP
Sbjct: 836 QVKNTVIVPVGAKGGFVCKQLPTEGGRDAFFTEGQECYRLFIRGLLDISDNIVEGEIVPP 895
Query: 893 KNVVRHDEDDPYLVVAADKGTATFSDLANSVSAEYQFWLGDAFASGGSNGYDHKAMGITA 952
NVVRHDEDDPYLVVAADKGTATFSD+AN++S EY FWLGDAFASGGSNGYDHK MGITA
Sbjct: 896 ANVVRHDEDDPYLVVAADKGTATFSDIANAISEEYGFWLGDAFASGGSNGYDHKKMGITA 955
Query: 953 KGGWESVKRHFREMGIDCQTTDFTAIGIGDMAGDVFGNGMLLSKHIRLLAAFNHIHIFID 1012
+G WESVKRHFRE+G+DCQTTDFT + IGDMAGDVFGNGMLLS+H RL+ AFNH+HIFID
Sbjct: 956 RGAWESVKRHFREIGVDCQTTDFTCLAIGDMAGDVFGNGMLLSEHTRLVTAFNHMHIFID 1015
Query: 1013 PTPDSASSWEERNRLFNLPRSSWEDYNPKLISKGGGVFSRKAKAITLTPEMQKMLNTKKT 1072
P PD+ASS++ER RLF +PRSSWEDYN LISKGGG+F R AK+ITLTPEM+KML+TKK
Sbjct: 1016 PNPDAASSYKERARLFEMPRSSWEDYNKDLISKGGGIFLRSAKSITLTPEMKKMLDTKKA 1075
Query: 1073 TLAPNELIKMILKMEVDLLWNGGIGTYVKSSIETHTDVGDRANDGLRVDGREVNAKIIGE 1132
++ PNEL+K +LKM+VDL+WNGGIGTY+K++ ETH +VGDRAND LRV+G EV A+IIGE
Sbjct: 1076 SMTPNELLKELLKMKVDLIWNGGIGTYIKATSETHAEVGDRANDALRVNGNEVQARIIGE 1135
Query: 1133 GGNLGMTQRGRIEFALKGGRVNTDFVDNVGGVDCSDNEVNIKIFLNGLVANGDLTLKQRN 1192
GGNLG TQ GRIE+A GGR+NTDFVDNVGGVDCSDNEVNIKI LN +VA G++T+KQRN
Sbjct: 1136 GGNLGCTQLGRIEYAANGGRMNTDFVDNVGGVDCSDNEVNIKILLNAMVAEGEMTVKQRN 1195
Query: 1193 QILESMKDEVGSIVIEDAYGQSESISVTEAQGVSLMKEQIRFIHHMEKAGYLDRALEHIP 1252
++L M DEV IV++D Q+ +ISVT+ +G +KEQIRFIH++EK LDRALE +P
Sbjct: 1196 RLLVEMTDEVSRIVLQDCKDQTRTISVTQVRGAEQLKEQIRFIHYLEKEDKLDRALEFLP 1255
Query: 1253 DDETLLERERQGMGLTRPELSVLMAYGKMALKEELASEEIAQDEFHAKQLVNYFPTELRG 1312
D+ L ER G LTRPELSVL+AY KM LKE+L + EI D F ++ L+ YFP +L+
Sbjct: 1256 TDDELAERLANGKSLTRPELSVLVAYAKMVLKEQLLTPEITDDSFLSQLLIEYFPRQLQE 1315
Query: 1313 HYAQQMVNHPLRVEIIATALANQMVNEMGCNFVTRLQEETGSSVVDIANAYAAAREIYGL 1372
Y+++MV HPLR EIIAT+LAN++VN+MG NFV R+Q+ETG+SV + A Y ARE++GL
Sbjct: 1316 KYSERMVTHPLRAEIIATSLANELVNDMGLNFVQRMQDETGASVAEAAICYTMAREVFGL 1375
Query: 1373 GIVLEKVRKLDNIAQSSAQYDVMFLVRRTLRRLTRWLLRNRTGKPSVIAMVERYQEDVKA 1432
+ + + L+ + + Q +++ +RR LRR RW LR+R S+ +V + +
Sbjct: 1376 AELTKSITALNGVVPAVVQGEMLHQLRRNLRRACRWFLRHRNRNQSIEQVVAFFSPVFQE 1435
Query: 1433 ITEQLDKVLVKEEIVEHNSMAENWIEKGIEKELAHYVARLSSLYSVLDISAVAKEKGIAV 1492
+ + + + LV++E+ + +++G+ +++A V +S+L+S LDIS +A+ + V
Sbjct: 1436 LRQNVHQYLVEDEVNGIRAEIAALVKEGVPEQVATDVVNMSTLFSALDISQIAELEDKPV 1495
Query: 1493 TQTAKLYFHLGDRLSLHWFLKQINHQAVDNHWQALARASFREDLDWQQRQLTAQVLSSNL 1552
A+ Y+ LG R+ LHWFL+QI+ Q V NHWQALARA+FRE+LDWQQR L++ VL +
Sbjct: 1496 ALVAETYYKLGARIDLHWFLEQISAQPVANHWQALARAAFREELDWQQRSLSSVVLRTCP 1555
Query: 1553 SDAQQEIELALDKWLERNQVSISRWENILSEFKVGTVHEFAKFSVALRELTLLNLNC 1609
S E + +D+W+E NQ + RW ++L++FK HEFAKFSVALREL LL L+C
Sbjct: 1556 SVC--EADAIIDQWVESNQGLLERWFHMLADFKTSQTHEFAKFSVALRELNLLILHC 1610