Pairwise Alignments

Query, 336 a.a., dihydroorotate dehydrogenase (quinone) from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., dihydroorotate dehydrogenase 2 from Synechococcus elongatus PCC 7942

 Score =  242 bits (617), Expect = 1e-68
 Identities = 141/310 (45%), Positives = 190/310 (61%), Gaps = 18/310 (5%)

Query: 38  YRQQLPHRPVQCMGLTFKNPVGLAAGLDKNGECIEAFGAMGFGFVEVGTVTPRPQAGNDK 97
           Y  Q P   +   GLTF  PVGLAAG DK+G     +  +GFGF E+GTVT   Q GN +
Sbjct: 53  YGFQDPRLAMSLWGLTFATPVGLAAGFDKDGIAAPLWSDLGFGFAELGTVTALAQPGNPR 112

Query: 98  PRLFRLVHAEGIINRMGFNNLGVDHLVENVKRAKYDG----IIGINIGKNKDTPIEKGAE 153
           PRLFR+       NRMGFNN   + L + ++    +G     IGIN+GK+K TP+     
Sbjct: 113 PRLFRIPQDLAAFNRMGFNNASAEALADTLRGYFPEGQRSIPIGINLGKSKLTPLSGAVS 172

Query: 154 DYLICMDKVYPYAGYIAVNISSPNTPGLRSLQYGEALDELLAALKTRQAELAAKHDKYVP 213
           DY+     +     Y  VN+SSPNTPGLRSLQ    L+ +LAAL+       A++ +  P
Sbjct: 173 DYVSSFRSLRSLGDYFVVNVSSPNTPGLRSLQAVTELEPILAALQ-------AENTEQRP 225

Query: 214 LALKIAPDLSDDEIQQICQSLLKNKIDSVIATNTTLDRSL--VEGM-----KFANEAGGL 266
           L LKIAPDL D+E+  I     + ++  +IATNTT+D+SL  VE +       A EAGG+
Sbjct: 226 LLLKIAPDLVDEEVVAIAHLAQRQQLAGIIATNTTIDKSLLSVEHLPGRREPLATEAGGI 285

Query: 267 SGRPLQNRSTEVIKCLYKELGEEIPIIGVGGIDSYISAKEKLLAGAKLVQVYSGFIYQGP 326
           SG PL++RSTEVI+ L++    ++PIIGVGGI S   A +K++AGA LVQVY+G++Y+GP
Sbjct: 286 SGAPLRSRSTEVIRLLHRTTQGQLPIIGVGGIFSAEDAWQKIVAGASLVQVYTGWVYEGP 345

Query: 327 GLVADIVKNL 336
            LV  I + L
Sbjct: 346 LLVKTIQQGL 355