Pairwise Alignments

Query, 336 a.a., dihydroorotate dehydrogenase (quinone) from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., dihydroorotate dehydrogenase PyrD from Phaeobacter inhibens DSM 17395

 Score =  229 bits (584), Expect = 8e-65
 Identities = 143/335 (42%), Positives = 185/335 (55%), Gaps = 14/335 (4%)

Query: 4   RLARAGFFQLDAEKAHDLAISNFKR-FTGTPFDLFYRQQLPHRPVQCMGLTFKNPVGLAA 62
           RLA A   + D E AH L+I   K   T TP  +      P    +  GL   NPVGLAA
Sbjct: 6   RLALAALHRCDPEAAHGLSIKALKMGLTPTPGPV----TSPRLATRIAGLDLPNPVGLAA 61

Query: 63  GLDKNGECIEAFGAMGFGFVEVGTVTPRPQAGNDKPRLFRLVHAEGIINRMGFNNLGVDH 122
           G DKN E +      GFGF+EVG  TPRPQ GN KPRLFRL   +  INR GFNN G+  
Sbjct: 62  GFDKNAEALRPLSQAGFGFIEVGAATPRPQPGNPKPRLFRLTEDQAAINRFGFNNEGMAV 121

Query: 123 LVENVKRAKYDGIIGINIGKNKDTPIEKGAEDYLICMDKVYPYAGYIAVNISSPNTPGLR 182
           + + +     D +IG+N+G NKD+     A D+   +     +  +  VN+SSPNT  LR
Sbjct: 122 IGQRLAVRPQDAVIGLNLGANKDS--GDRAADFAKVLAHCGEHLDFATVNVSSPNTEKLR 179

Query: 183 SLQYGEALDELL-AALKTRQAELAAKHDKYVPLALKIAPDLSDDEIQQICQSLLKNKIDS 241
            LQ   AL  LL   + TR        D+ VP+ LKIAPDL    I+ I +  ++  ID+
Sbjct: 180 DLQGKAALSALLNGVIDTRDG-----LDRRVPVFLKIAPDLDRAGIEDIAEVAVETGIDA 234

Query: 242 VIATNTTLDRSLVEGMKFANEAGGLSGRPLQNRSTEVIKCLYKELGEEIPIIGVGGIDSY 301
           VIATNTTL R+ +      +EAGGLSG PL  +ST V+  L + L   +P++GVGGI + 
Sbjct: 235 VIATNTTLKRTGLNS-SHRDEAGGLSGAPLFEKSTRVLAQLSELLNGRVPLVGVGGISNA 293

Query: 302 ISAKEKLLAGAKLVQVYSGFIYQGPGLVADIVKNL 336
             A  K+ AGA  VQ Y+  +Y G  LV DI + L
Sbjct: 294 EQAYAKICAGASAVQFYTAMVYGGLSLVGDIARGL 328