Pairwise Alignments

Query, 336 a.a., dihydroorotate dehydrogenase (quinone) from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., dihydroorotate dehydrogenase 2 (RefSeq) from Shewanella loihica PV-4

 Score =  437 bits (1123), Expect = e-127
 Identities = 216/333 (64%), Positives = 266/333 (79%)

Query: 1   MLYRLARAGFFQLDAEKAHDLAISNFKRFTGTPFDLFYRQQLPHRPVQCMGLTFKNPVGL 60
           M Y++A+   FQ+D EKAH+LAI + K    +P + FY Q+L   PV+ MGLTF NPVGL
Sbjct: 1   MFYKIAQKVMFQMDPEKAHNLAIGSLKSTANSPLNCFYAQKLQAAPVEFMGLTFPNPVGL 60

Query: 61  AAGLDKNGECIEAFGAMGFGFVEVGTVTPRPQAGNDKPRLFRLVHAEGIINRMGFNNLGV 120
           AAG+DK+GECI+AF AMGFG VEVGTVTPRPQ GND+PRLFRL  A+ IINRMGFNN GV
Sbjct: 61  AAGMDKDGECIDAFHAMGFGHVEVGTVTPRPQPGNDQPRLFRLKPAKAIINRMGFNNKGV 120

Query: 121 DHLVENVKRAKYDGIIGINIGKNKDTPIEKGAEDYLICMDKVYPYAGYIAVNISSPNTPG 180
           D+LV N+K AK   ++G+NIGKNKDTP+E+G EDYLICM+KVYPYA YIAVNISSPNTPG
Sbjct: 121 DNLVANLKAAKSGAMVGVNIGKNKDTPVEQGKEDYLICMEKVYPYAAYIAVNISSPNTPG 180

Query: 181 LRSLQYGEALDELLAALKTRQAELAAKHDKYVPLALKIAPDLSDDEIQQICQSLLKNKID 240
           LRSLQYG+ LD+LL +LK +Q +LA +H KYVP+ALKIAPDL  DEI++I +SL++N+ D
Sbjct: 181 LRSLQYGDLLDDLLGSLKAKQKDLAERHGKYVPIALKIAPDLEPDEIEKIAESLIRNEFD 240

Query: 241 SVIATNTTLDRSLVEGMKFANEAGGLSGRPLQNRSTEVIKCLYKELGEEIPIIGVGGIDS 300
             IATNTTL R  V G+  +NEAGGLSG+PL + ST+VIK L   L  ++PIIGVGGI+S
Sbjct: 241 GAIATNTTLTRDGVSGLVNSNEAGGLSGKPLNSLSTKVIKQLADCLKGQVPIIGVGGINS 300

Query: 301 YISAKEKLLAGAKLVQVYSGFIYQGPGLVADIV 333
              A +KL AGA +VQ+YSGFIY+GP L+ +IV
Sbjct: 301 AADALDKLDAGATMVQIYSGFIYRGPELIKEIV 333