Pairwise Alignments

Query, 336 a.a., dihydroorotate dehydrogenase (quinone) from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., dihydroorotate dehydrogenase from Methanococcus maripaludis JJ

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 79/285 (27%), Positives = 140/285 (49%), Gaps = 31/285 (10%)

Query: 52  LTFKNPVGLAAG-LDKNGECIEAFGAMGFGFVEVGTVTPRPQAGNDKPRLFRLVHAEGII 110
           + FKNPV LAAG + + G  ++     G G V   +V    + G++ P +  +    G +
Sbjct: 9   IEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGIEKKPGHNNPTMVEV--EGGFL 66

Query: 111 NRMGFNNLGVDHLVENVKRAKYD------GIIGINIGKNKDTPIEKGAEDYLICMDKVYP 164
           N MG  N G D     ++R K +       IIG   GKN D+  +K AE        +  
Sbjct: 67  NAMGLPNPGADEYAGEIERIKDEMKRMNVKIIGSIYGKN-DSEFQKAAE-------VIAT 118

Query: 165 YAGYIAVNISSPNTPGLRSLQYGEALDELLAALKTRQAELAAKHDKYVPLALKIAPDLSD 224
           +   + +NIS P+  G     YG ++ +     K   +  A K    +P+  K+ P+++D
Sbjct: 119 HVDVLELNISCPHAGG----GYGSSIGQDPCLCKNVVS--AVKDVSDIPVIAKLTPNVTD 172

Query: 225 DEIQQICQSLLKNKIDSVIATNTTLDRSLVE---GMKF-ANEAGGLSGRPLQNRSTEVIK 280
             I++I  +++    D ++A NT     +++   G+    N+ GG+SG+ ++  + + + 
Sbjct: 173 --IKEIASAVVNAGADGIVAINTLGPGMVIDIESGVPILGNKVGGMSGKAIKPIAVKNVY 230

Query: 281 CLYKELGEEIPIIGVGGIDSYISAKEKLLAGAKLVQVYSGFIYQG 325
            +   +  ++P+IGVGGI +   A E ++AGA  VQV +G  Y+G
Sbjct: 231 DICSAV--DVPVIGVGGITTGADAIEFMMAGASAVQVGTGVYYRG 273