Pairwise Alignments

Query, 336 a.a., dihydroorotate dehydrogenase (quinone) from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., dihydroorotate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  418 bits (1075), Expect = e-122
 Identities = 213/334 (63%), Positives = 259/334 (77%)

Query: 1   MLYRLARAGFFQLDAEKAHDLAISNFKRFTGTPFDLFYRQQLPHRPVQCMGLTFKNPVGL 60
           M Y++A+   FQ+D E+AH+LAI + +     P + FY Q +   PV  MGLTF NPVGL
Sbjct: 1   MFYKIAQKVMFQMDPERAHNLAIGSLRMTGNGPLNAFYAQNITPAPVSFMGLTFPNPVGL 60

Query: 61  AAGLDKNGECIEAFGAMGFGFVEVGTVTPRPQAGNDKPRLFRLVHAEGIINRMGFNNLGV 120
           AAG+DK+GE I+AF AMGFG VEVGTVTPRPQ GND PRLFRL  A+ IINRMGFNN GV
Sbjct: 61  AAGMDKDGESIDAFHAMGFGHVEVGTVTPRPQPGNDLPRLFRLKPAKAIINRMGFNNKGV 120

Query: 121 DHLVENVKRAKYDGIIGINIGKNKDTPIEKGAEDYLICMDKVYPYAGYIAVNISSPNTPG 180
           D+LV+N+   K D ++G+NIGKNKDTP+E+G +DYLICMDKVY +A YIAVNISSPNTPG
Sbjct: 121 DNLVKNLIAKKTDIMVGVNIGKNKDTPVEQGKDDYLICMDKVYLHAAYIAVNISSPNTPG 180

Query: 181 LRSLQYGEALDELLAALKTRQAELAAKHDKYVPLALKIAPDLSDDEIQQICQSLLKNKID 240
           LRSLQYG+ LDELL+A+K +Q ELA KH KYVP+ALKIAPDL+ +EI+ I Q+L+KN+ D
Sbjct: 181 LRSLQYGDLLDELLSAIKAKQLELADKHKKYVPIALKIAPDLTIEEIENIAQALIKNQFD 240

Query: 241 SVIATNTTLDRSLVEGMKFANEAGGLSGRPLQNRSTEVIKCLYKELGEEIPIIGVGGIDS 300
             IATNTTL R  V G+  ANE+GGLSG+PL   ST+VIK L   L  +IPIIGVGGI+S
Sbjct: 241 GAIATNTTLTRDGVSGLANANESGGLSGKPLTELSTKVIKQLATCLQGQIPIIGVGGINS 300

Query: 301 YISAKEKLLAGAKLVQVYSGFIYQGPGLVADIVK 334
              A  K  AGA +VQ+YSGFIYQGP L+ +IV+
Sbjct: 301 AEDALAKFDAGATMVQIYSGFIYQGPKLIKEIVE 334