Pairwise Alignments

Query, 336 a.a., dihydroorotate dehydrogenase (quinone) from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., Dihydroorotate oxidase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  212 bits (540), Expect = 1e-59
 Identities = 135/336 (40%), Positives = 176/336 (52%), Gaps = 12/336 (3%)

Query: 2   LYRLARAGFFQLDAEKAHDLAISNFKRFTGTPFDLFYRQQLPHRPVQCMGLTFKNPVGLA 61
           L RL  A   ++D E AH LA+       G           P    Q  GL   NPVGLA
Sbjct: 4   LERLGLAALQRVDPETAHGLALRALNAGLGPRSGPVTS---PRLSTQLAGLRLPNPVGLA 60

Query: 62  AGLDKNGECIEAFGAMGFGFVEVGTVTPRPQAGNDKPRLFRLVHAEGIINRMGFNNLGVD 121
           AG DKN E + A    GFGF+EVG  TP PQ GN +PRLFRL      INR GFNN G +
Sbjct: 61  AGFDKNAETLGALAQTGFGFLEVGAATPLPQPGNPRPRLFRLSEDRAAINRFGFNNDGAE 120

Query: 122 HLVENVKRAKYDGIIGINIGKNKDTPIEKGAEDYLICMDKVYPYAGYIAVNISSPNTPGL 181
            +   + R     ++G+N+G NK +    G  D+   +     +  +  VN+SSPNT  L
Sbjct: 121 AIAARLARRPEGRVVGLNLGANKTSADRAG--DFARVLATCGAHVDFATVNVSSPNTEKL 178

Query: 182 RSLQYGEALDELLAALKTRQAELAAKHDKYVPLALKIAPDLSDDEIQQICQSLLKNKIDS 241
           R LQ   AL  LL  +   +A L     + +P+ LKIAPD+ D  +  I   + +  +  
Sbjct: 179 RDLQGAAALRALLEGVMAARAALV----RPIPVFLKIAPDMDDAALDDIAGVVTEAGLHG 234

Query: 242 VIATNTTLDR-SLVEGMKFANEAGGLSGRPLQNRSTEVIKCLYKELGEEIPIIGVGGIDS 300
           +IATNTTL R  LV   K   EAGGLSG PL   ST V+  L +     +P+IGVGG+DS
Sbjct: 235 IIATNTTLARDGLVSAHK--GEAGGLSGAPLFEASTRVLARLSQATEGTVPLIGVGGVDS 292

Query: 301 YISAKEKLLAGAKLVQVYSGFIYQGPGLVADIVKNL 336
             +A  K+ AGA  VQ+Y+  +Y G  L A+I   L
Sbjct: 293 AGAAYAKIRAGASAVQLYTALVYGGISLAAEIATGL 328