Pairwise Alignments

Query, 336 a.a., dihydroorotate dehydrogenase (quinone) from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., dihydroorotate dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  163 bits (413), Expect = 5e-45
 Identities = 102/296 (34%), Positives = 149/296 (50%), Gaps = 18/296 (6%)

Query: 46  PVQCMGLTFKNPVGLAAGLDKNGECIEAFGAMGFGFVEVGTVTPRPQAGNDKPRLFRLVH 105
           P     L FKN +GL+AG DKN E  +     GFGF+EVGTVTP  Q GN   R+FRLV 
Sbjct: 28  PFSYGSLRFKNRIGLSAGFDKNAETFDELADFGFGFLEVGTVTPDYQPGNPSSRIFRLVE 87

Query: 106 AEGIINRMGFNNLGVDHLVENVKR-AKYDGIIGINIGKNKDTPIEKGAEDYLICMDKVYP 164
            E +I+R GFNN GVD  + +++R  K+  I+G+NI KN  +  E+  +D+ +   ++Y 
Sbjct: 88  DESLISRTGFNNCGVDVALAHIRRHRKHSYILGVNINKNPLSVGEQIIKDFELVFTRLYE 147

Query: 165 YAGYIAVNISSPNTPGLRSLQYGEALDELLAALKTRQAELAAKHDKYVPLALKIAPDLSD 224
              Y  +N             +G    E  A +           +K   + +K+  D+ +
Sbjct: 148 SVDYFTLN-------------WGSIDKESFAKVLENFTTFREAVNKRCSIFIKLPADIDE 194

Query: 225 DEIQQICQSLLKNKIDSVIATNTTLDRSLVEGMKFAN----EAGGLSGRPLQNRSTEVIK 280
            E+  +     K  I+  IAT  T+DRS +   K         GG+SGR +  +S +V+ 
Sbjct: 195 KELDLVISLAYKYSIEGFIATGPTMDRSELHQTKTKQLEKIGNGGVSGRGIGKKSQKVVH 254

Query: 281 CLYKELGEEIPIIGVGGIDSYISAKEKLLAGAKLVQVYSGFIYQGPGLVADIVKNL 336
            L +       IIG GGI +   A + +  GA +VQ+YS FIY GP +V  I K L
Sbjct: 255 YLSEHTDRHFLIIGAGGIMTAEDAADMISQGADMVQIYSAFIYSGPSVVHKIGKKL 310