Pairwise Alignments

Query, 708 a.a., ribosomal RNA large subunit methyltransferase K/L from Vibrio cholerae E7946 ATCC 55056

Subject, 756 a.a., 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  589 bits (1519), Expect = e-172
 Identities = 326/743 (43%), Positives = 443/743 (59%), Gaps = 52/743 (6%)

Query: 11  GLENLLVEELTQLGINDAKPVQAGVKFKATNEQIYRCCLWSRLASRFVRIVAEFKCQNDL 70
           GLE LL+EE   LG+ DA+   + V+  A  E  YR CLWSRLA+R + ++  F  ++  
Sbjct: 14  GLEGLLIEEAVGLGLEDAREHTSAVRGMADMETAYRLCLWSRLANRVLLVLKRFPMKDAE 73

Query: 71  DLYLSTTSVNWVNYFHSSKKLVVDFNGTNREIRNSQYGAMKVKDAIVDCFTKKNLPRPSI 130
           DLY     V+W ++  +   L V+F+G    I N+ +GA+KVKDAIVD     +  RPSI
Sbjct: 74  DLYHGVLDVDWQDHMLADGTLAVEFSGHGSGIDNTHFGALKVKDAIVDKLRTPSGERPSI 133

Query: 131 SKDLADLHIHVRLHKENALLGIDMVGSGLHARGYRTEAGKAPLRETLAAAIILRSGWDA- 189
            K   DL IH+RL +  A+L +D+ G  LH RGYR + G APL+E LAAAI++R+GW   
Sbjct: 134 DKLNPDLRIHLRLDRGEAILSLDLSGHSLHQRGYRLQQGAAPLKENLAAAILIRAGWPRI 193

Query: 190 ---SKPLLDPMCGSGTLLIEAAMMAANIAPGLQRKKWGFEALEDFEPELWASVKSEASVQ 246
                 L DPMCG GT L+EA M+AA++AP L+R++WGF A     P LW  +  EA+ +
Sbjct: 194 AAEGGALADPMCGVGTFLVEAGMIAADMAPNLRRQQWGFTAWLGHVPALWKKLHEEATAR 253

Query: 247 GKRGVKKVETHFYGVDNDNRVLQTAKDNARRAGVEELISFTLGDAAKVK-RPENFAEGIV 305
              G+ K      G + D R++Q  ++N  RAG+ E I    G+ A  + RP+   +G+V
Sbjct: 254 AAAGLAKPPLWIRGYEADPRLIQPGRNNVERAGLSEWIKIYQGEVATFEPRPDQNQKGLV 313

Query: 306 ICNPPYGERLGTHPGLIALYTAFGAQLKAEFGGCHASIFSSSDELLSCLRMRADKQFKLN 365
           ICNPPYGERLG    L+ LY   G +L+       A++F+ + +L   + +R+ KQ+   
Sbjct: 314 ICNPPYGERLGDEASLLYLYQNLGERLRQACLNWEAAVFTGAPDLGKRMGIRSHKQYSFW 373

Query: 366 NGALPCHQKNYTI-----------------AMREQNSVS-----------NEGTQEILIA 397
           NGALPC      +                 A REQ +             N+    I  A
Sbjct: 374 NGALPCKLLLIKVLPDQFVTGERRTPEQRQAEREQAAYDQAPEVPQERQYNKNGNPIKPA 433

Query: 398 PD----------------FANRLKKNFNKIGKWAKREGLDCFRLYDADLPEYNVAIDVYQ 441
           P                 FANRL+KN   + KWAKREG+DC+R+YDAD+PEY++AID+Y 
Sbjct: 434 PAPAPVVEQARLSEGGQMFANRLQKNLKLLSKWAKREGVDCYRVYDADMPEYSMAIDLYH 493

Query: 442 DHLMIQEYAAPKDIPEEKAKRRLTDIIRAAIQVLDVDANNVVLKVRERQKGTSQYEKLGQ 501
           D + +QEY APK I  EKA  RL D + A  Q L+VD + VV+K RERQ GT QYE+   
Sbjct: 494 DWVHVQEYVAPKSIDPEKASARLFDALAAIPQALNVDKSRVVIKRRERQSGTKQYERQSA 553

Query: 502 QAQTMQITEYGVKLIVNLYDYLDTGLFLDHKITRRRLGQMAQGKDFLNLFAYTGSATVHA 561
           Q +  ++ E GVKL+VNL DYLDTGLFLDH+  R R+ + A GK FLNLF YT +A+VHA
Sbjct: 554 QGKFTEVNEGGVKLLVNLTDYLDTGLFLDHRPMRLRIQKEAAGKRFLNLFCYTATASVHA 613

Query: 562 ACGGAKSTTTVDMSKTYLEWAKENMQLNGQVGRQHQYVQADCLQWLANAQSQYDLIFIDP 621
           A GGA+STT+VD+SKTYL+WA+ N+ LNG    +++  Q D + WL  ++ +YDLIFIDP
Sbjct: 614 AKGGARSTTSVDLSKTYLDWARRNLSLNG-FSDKNRLEQGDVMAWLEASRDEYDLIFIDP 672

Query: 622 PTFSNSKRMEQTFDVQRDHVTLMTNLKRLLRPEGTIVFSNNKRHFKMDMEALHALGLNAQ 681
           PTFSNSKRME  FDVQRDHV L+      L P G + FSNN R F+++        +  +
Sbjct: 673 PTFSNSKRMEGIFDVQRDHVQLLDLAMARLAPGGVLYFSNNFRKFQLEDNLGERYAV--E 730

Query: 682 NISHQTLPLDFERNKQIHNCWLI 704
            I+ +T+  DF RN +IH  W I
Sbjct: 731 EITAKTIDPDFARNGKIHRAWKI 753