Pairwise Alignments

Query, 708 a.a., ribosomal RNA large subunit methyltransferase K/L from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., Predicted N6-adenine-specific DNA methylase from Phaeobacter inhibens DSM 17395

 Score =  173 bits (438), Expect = 2e-47
 Identities = 113/351 (32%), Positives = 173/351 (49%), Gaps = 20/351 (5%)

Query: 11  GLENLLVEELTQLGINDAKPVQAGVKFKATNEQIYRCCLWSRLASRFVRIVAEFKCQNDL 70
           G+E  L  E  + G  DAK V  GV F+     ++R  L  R A+R +  +  F+  +  
Sbjct: 16  GMEQALQREAAEAGFADAKTVPGGVTFEGDWHDVWRANLQLRGAARVLARIGSFRAFHLA 75

Query: 71  DLYLSTTSVNWVNYFHSSKKLVVDFNGTNREIRNSQYGA--MKVKDAIVDCFTKKNLPRP 128
            L        W +       + V+   TN++ +    GA   +++ AI +          
Sbjct: 76  QLDKRARKFPWADVLRPDVPVRVETT-TNKKSKIYHAGAATQRIERAITEELGA------ 128

Query: 129 SISKDLADLHIHVRLHKENALLGIDMVGSGLHARGYRTEAGKAPLRETLAAAIILRSGWD 188
           SIS D A + + +R+        +D  G GLH RG++T  GKAP+RE LAA  +   G+D
Sbjct: 129 SISAD-APITVKLRIEDNLCTFSVDTSGEGLHKRGHKTAVGKAPMRENLAALFLRDCGYD 187

Query: 189 ASKPLLDPMCGSGTLLIEAAMMAANIAPGLQRKKWGFEALEDFEPELWASVKSEASVQGK 248
             +P++DPMCGSGT +IEAA +A  + PG  R  + FE +  F+PE WA+++++ + +  
Sbjct: 188 GQEPVVDPMCGSGTFVIEAAEIALGLLPGRSR-SFAFEQMASFDPEGWAALRAQETPRAT 246

Query: 249 RGVKKVETHFYGVDNDNRVLQTAKDNARRAGVEELISFTLGDAAKVKRPE---NFAEGIV 305
           R         +G D +   ++ A  NA RAGV +L+  T    + +  P+   N   G+V
Sbjct: 247 R------ARCFGSDRNAGAVEMAAANAERAGVADLVQITQQAVSDLTPPDLGPNETPGLV 300

Query: 306 ICNPPYGERLGTHPGLIALYTAFGAQLKAEFGGCHASIFSSSDELLSCLRM 356
           I NPPYG R+G    L ALY A G  L A F G    I +S   L    ++
Sbjct: 301 IVNPPYGARIGNKKLLYALYAALGETLMARFRGWRVGIATSETSLAKATQL 351