Pairwise Alignments

Query, 708 a.a., ribosomal RNA large subunit methyltransferase K/L from Vibrio cholerae E7946 ATCC 55056

Subject, 711 a.a., 23S rRNA m(2)G2445 methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  728 bits (1878), Expect = 0.0
 Identities = 365/712 (51%), Positives = 481/712 (67%), Gaps = 8/712 (1%)

Query: 1   MNQYLAVTSNGLENLLVEELTQLGINDAKPVQAGVKFKATNEQIYRCCLWSRLASRFVRI 60
           M  + A    G E  L  EL + G  + K   AGV F A     YR  LWSRLASR + +
Sbjct: 1   MLNFFAAAPRGYEYALSLELAEFGAAEIKESVAGVYFSAPLNLAYRITLWSRLASRIILV 60

Query: 61  VAEFKCQNDLDLYLSTTSVNWVNYFHSSKKLVVDFNGTNREIRNSQYGAMKVKDAIVDCF 120
           + +  C+N   LY +   ++W  +F +     +DF+G    I+NSQ+GA+K+KDA+VD F
Sbjct: 61  IYKGPCENPEQLYNAAYCIDWQTHFSNKSSFSIDFHGVGGFIKNSQFGALKIKDAVVDRF 120

Query: 121 TKKNLPRPSISKDLADLHIHVRLHKENALLGIDMVGSGLHARGYRTEAGKAPLRETLAAA 180
                PRP +++  AD  I     +    LGI+  G  LH RGYR+  G+APL+E LAA 
Sbjct: 121 RDDGCPRPDVARVDADFKIDAHYRRGQITLGINFSGPALHQRGYRSTTGEAPLKENLAAN 180

Query: 181 IILRSGWDAS-KPLLDPMCGSGTLLIEAAMMAANIAPGLQRKKWGFEALEDFEPELWASV 239
           +++RSGW  S K LLDP CGSGT+LIEAAMMA +IAP LQR+++GFE     +   W  +
Sbjct: 181 MLVRSGWQQSPKDLLDPFCGSGTILIEAAMMACDIAPALQRRRFGFEHWLRHQEADWQEL 240

Query: 240 KSEASVQGKRGVKKVETHFYGVDNDNRVLQTAKDNARRAGVEELISFTLGDAAKVKRPEN 299
            +EA  +   G K+ E  FYG D D+R++  AK NA+ AGV ELI  ++ +A  V  P  
Sbjct: 241 LAEAKARASIGTKRCEIKFYGSDIDSRLVALAKRNAQNAGVAELIELSVSNALNVTPPVE 300

Query: 300 FAEGIVICNPPYGERLGTHPGLIALYTAFGAQLKAEFGGCHASIFSSSDELLSCLRMRAD 359
             +G +I NPPYGERLG    L+ LY   G +LKAEFGG   ++ +S  ELLS L+++AD
Sbjct: 301 --QGYLITNPPYGERLGNVTSLLQLYYQLGDKLKAEFGGWQVAVLNSDIELLSALKLKAD 358

Query: 360 KQFKLNNGALPCHQKNYTIAMR-----EQNSVSNEGTQEILIAPDFANRLKKNFNKIGKW 414
           KQ K+ NGAL C    YT+        + + V ++G +   +A  F+NR+KKN  ++ KW
Sbjct: 359 KQMKMYNGALECAFNLYTLHANSTRRLDPSQVLSQGGEVSEVATAFSNRIKKNHKQLSKW 418

Query: 415 AKREGLDCFRLYDADLPEYNVAIDVYQDHLMIQEYAAPKDIPEEKAKRRLTDIIRAAIQV 474
           A+REG+D +RLYDAD+PEYNVA+D+Y DH++IQEY+APK IPE   KRRLTD++    Q 
Sbjct: 419 AQREGIDSYRLYDADIPEYNVAVDIYLDHVVIQEYSAPKSIPEAVTKRRLTDVLLVLPQA 478

Query: 475 LDVDANNVVLKVRERQKGTSQYEKLGQQAQTMQITEYGVKLIVNLYDYLDTGLFLDHKIT 534
           + VD + ++LK RERQKGT+QY+KL      +  TEYG K  +NL DYLDTGLFLDH++T
Sbjct: 479 IGVDPDKIILKTRERQKGTNQYQKLDATKLELVTTEYGAKFKLNLKDYLDTGLFLDHRLT 538

Query: 535 RRRLGQMAQGKDFLNLFAYTGSATVHAACGGAKSTTTVDMSKTYLEWAKENMQLNGQVGR 594
           R+ +G+ ++G+D LNLFAYTGSA+VHAA GGAKS TTVDMS TYL WA++N +LNG  G+
Sbjct: 539 RKLVGEKSKGRDVLNLFAYTGSASVHAALGGAKSVTTVDMSNTYLNWAQDNFELNGLKGK 598

Query: 595 QHQYVQADCLQWLANAQSQYDLIFIDPPTFSNSKRMEQTFDVQRDHVTLMTNLKRLLRPE 654
           Q+Q++Q DCLQW+ +   QYDLIFIDPPTFSNSKRME +FDVQRDHV L++ L +LLRP 
Sbjct: 599 QYQFIQGDCLQWIDDCDQQYDLIFIDPPTFSNSKRMEDSFDVQRDHVKLLSALVKLLRPG 658

Query: 655 GTIVFSNNKRHFKMDMEALHALGLNAQNISHQTLPLDFERNKQIHNCWLITH 706
           G I+FSNNKR FKMD EAL ALGL+  N+  QTLPLD++RN  IHN WLI H
Sbjct: 659 GEILFSNNKRKFKMDSEALSALGLSITNLDKQTLPLDYKRNPHIHNTWLIQH 710