Pairwise Alignments

Query, 708 a.a., ribosomal RNA large subunit methyltransferase K/L from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 60.8 bits (146), Expect = 9e-14
 Identities = 52/164 (31%), Positives = 71/164 (43%), Gaps = 6/164 (3%)

Query: 500 GQQAQTMQITEYGVKLIVNLYDYLDTGLFLDHKITRRRLGQMAQGKDFLNLFAYTGSATV 559
           G+  +   +TE   K  V+L    + GLFLD    R  +   A+ K  LNLFAYT   +V
Sbjct: 95  GEVPEQHIVTENRAKFQVHLLRGQNHGLFLDMANGREWVRANARHKKILNLFAYTCGFSV 154

Query: 560 HAACGGAKSTTTVDMSKTYLEWAKENMQLNGQVGRQHQYVQADCLQW-LANAQSQYDLIF 618
            A  GGA     +DMSK  L   K+N  LN                W        YD++ 
Sbjct: 155 AALQGGADEVVNMDMSKGALAIGKQNHLLNDFTAGARFLGHDIFKSWGKLRKLGPYDIVV 214

Query: 619 IDPPTFSNSKRMEQTFDVQRDHVTLMTNLKRLLRPEGTIVFSNN 662
            DPP  SN K    +F   +D+V L+ +L  LL     ++   N
Sbjct: 215 ADPP--SNQK---GSFVATKDYVRLIRHLPELLAENAEVLLCLN 253