Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., ATPase components of ABC transporters with duplicated ATPase domains from Pseudomonas stutzeri RCH2

 Score =  642 bits (1655), Expect = 0.0
 Identities = 333/638 (52%), Positives = 440/638 (68%), Gaps = 12/638 (1%)

Query: 1   MALITIHNGLLAFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKM 60
           M L+   +  LA+G  PLLD   + +   ERVC++GRNG GKS++++++ G+   DDG++
Sbjct: 1   MTLLKFTDVSLAYGTTPLLDGVSWQIARGERVCIIGRNGTGKSSMLRLVKGDRSADDGEI 60

Query: 61  QVMQDVVVSRLEQDPPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKL 120
                + +  L Q+ PR    TVFD V+ GL G+GE L  Y     L      E+++ KL
Sbjct: 61  WRAPGLKIGELPQELPRADDRTVFDVVAEGLAGVGELLAEYHH---LSQNIQDEADLEKL 117

Query: 121 AHIQEQLEVSGAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLL 180
            H+Q+ LE    WR +  + + L  L+L     L +LSGGW+R+  LA+AL  +PD+LLL
Sbjct: 118 MHVQQALEAKDGWRLQQLVDSTLSRLQLPADRTLAELSGGWRRRVLLAQALVSEPDLLLL 177

Query: 181 DEPTNHLDVTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYEN 240
           DEPTNHLD+  I WLE  L  F G+++FI+HDRAF++++ATRI++LDRG L  + GDY +
Sbjct: 178 DEPTNHLDIGAIAWLEEALTGFNGAVLFITHDRAFLQNLATRILELDRGHLIDWNGDYAS 237

Query: 241 YLTEKEEMLRVEELQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSERRE 300
           +L  KE+ L  EE  NA FDKKLAQEEVWIRQGIKARRTRNEGRVRALK LR ERSERR 
Sbjct: 238 FLVHKEQQLAAEETANALFDKKLAQEEVWIRQGIKARRTRNEGRVRALKALRAERSERRN 297

Query: 301 VQGKVNLQIDDSNRSGKIVFEAENLHYS-IGGKTIVDGFSFNIMRGDRIALIGPNGCGKS 359
           VQGK   Q++ + +SGK V  AE + ++ +GG+ ++  FS  I RGDRI L+G NG GK+
Sbjct: 298 VQGKATFQVETAEKSGKQVIVAEQVTFAHVGGEPLIRDFSMVIQRGDRIGLLGANGTGKT 357

Query: 360 TLLKILLGDLQPDSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVMVGGRLRH 419
           TLLK+LLG+L P SG +  GTKLEVAYFDQ R  L+ EKTV+DNLA+G++ + + G+ RH
Sbjct: 358 TLLKLLLGELHPSSGSIEFGTKLEVAYFDQLRHQLELEKTVVDNLAEGREFITIDGQNRH 417

Query: 420 ALSYLQDFLFSPKRARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLELL 479
            LSYL DFLFSP+RARTPVKALSGGE+ RLLLA++  K  NLLVLDEPTNDLD+ETLELL
Sbjct: 418 VLSYLGDFLFSPQRARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETLELL 477

Query: 480 EELLANYQGTLLLVSHDREFVDNTVTSSWIFEGDGKIEEFVGGYHDAQQQRAQ-----VL 534
           EE+L  +QGT+L+VSHDR F+DN VTS+ +F+G G++ E+VGGY D  +Q        V 
Sbjct: 478 EEVLLGFQGTVLMVSHDRAFLDNVVTSTLVFQGGGEVREYVGGYQDWLRQGGSPRLLGVA 537

Query: 535 QSRAAENIVKKEKVVEESPKSAPSKTKQKKLSYKLQRELEALPQRLEELEVEIAALQDIV 594
           +S       ++  V     + AP+K   KKLSYKLQRELEALP +++E E  I ALQ  +
Sbjct: 538 ESGGEAKKAQQAPVAAVVAEVAPAK---KKLSYKLQRELEALPGQIDEAEKAIEALQAEI 594

Query: 595 NSPDFFSQPVDKTQPILDKLTATEQELEIAFERWEELE 632
           + P F+ Q  DKT  +L +L A + EL+   ERW ELE
Sbjct: 595 SDPAFYQQAADKTAAVLSRLEALQAELDGLLERWAELE 632