Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  625 bits (1613), Expect = 0.0
 Identities = 325/638 (50%), Positives = 439/638 (68%), Gaps = 9/638 (1%)

Query: 1   MALITIHNGLLAFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKM 60
           M L+   +  LAFG  PLLD   + +   ERVC++GRNG GKS+++K++ G    D+G +
Sbjct: 1   MTLLKFSDVSLAFGAMPLLDKVSWQIARGERVCIIGRNGTGKSSMLKLVKGVQKPDEGAV 60

Query: 61  QVMQDVVVSRLEQDPPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKL 120
                + +  L Q+ P     TVFD V+ GL G+G  L  Y     L     +E ++NKL
Sbjct: 61  WRAPGLKIGELPQELPVADGRTVFDVVAEGLDGVGALLAEYHH---LAQNCVTEEDLNKL 117

Query: 121 AHIQEQLEVSGAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLL 180
            H+Q+ LE    WR +  +++ L  L+L     L +LSGGW+R+  LA+AL  +PD+LLL
Sbjct: 118 MHVQQDLEARDGWRLQQLVESTLSRLQLPADKTLAELSGGWRRRVLLAQALVSEPDLLLL 177

Query: 181 DEPTNHLDVTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYEN 240
           DEPTNHLD+  I WLE  LKDF+G+++FI+HDRAF++++ATRI++LDRG L  + GDY +
Sbjct: 178 DEPTNHLDIGAIAWLEEALKDFQGAVLFITHDRAFLQNLATRILELDRGGLIDWDGDYAS 237

Query: 241 YLTEKEEMLRVEELQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSERRE 300
           +L  KE  L  EE  NA FDK+LAQEEVWIRQGIKARRTRNEGRVRALK LR ERSERRE
Sbjct: 238 FLVHKEAALAAEETANALFDKRLAQEEVWIRQGIKARRTRNEGRVRALKELRVERSERRE 297

Query: 301 VQGKVNLQIDDSNRSGKIVFEAENLHYSI-GGKTIVDGFSFNIMRGDRIALIGPNGCGKS 359
             GK N+Q+D + +SGK V   +N+ ++  GG T++  FS  + R DRI L+G NG GK+
Sbjct: 298 RTGKANIQLDTAEKSGKQVMVLDNVSFAHPGGPTLIKDFSMVLQREDRIGLLGANGTGKT 357

Query: 360 TLLKILLGDLQPDSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVMVGGRLRH 419
           TLLK++L +LQP  GKV  GT+L+VAYFDQ R  LD EKTVIDN+A+G+  + + G+ RH
Sbjct: 358 TLLKLMLDNLQPTGGKVEVGTRLDVAYFDQLRHQLDLEKTVIDNVAEGRDFIDIDGQSRH 417

Query: 420 ALSYLQDFLFSPKRARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLELL 479
            LSYL DFLFSP+RARTPVKALSGGE+ RLLLA++  K  NLLVLDEPTNDLD+ETLELL
Sbjct: 418 VLSYLGDFLFSPQRARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETLELL 477

Query: 480 EELLANYQGTLLLVSHDREFVDNTVTSSWIFEGDGKIEEFVGGYHDAQQQRAQVLQSRAA 539
           EE+L  ++GT+L+VSHDR F+DN VTS+ +FEG+GK+ E+VGGY D  +Q         A
Sbjct: 478 EEVLLTFKGTVLMVSHDRAFLDNVVTSTLVFEGEGKVREYVGGYQDWLRQGGSPRLLGVA 537

Query: 540 ENIVKKEKVVEESPKSAPSKTK-----QKKLSYKLQRELEALPQRLEELEVEIAALQDIV 594
           +    K ++     ++AP   +     +KKLSYKLQRELEALP +++E+E ++AAL   +
Sbjct: 538 DTKSGKAELASAVVQAAPVAAQDMPVAKKKLSYKLQRELEALPAQIDEVEGKMAALNAEM 597

Query: 595 NSPDFFSQPVDKTQPILDKLTATEQELEIAFERWEELE 632
             P F+ +  ++T  +L +L   + EL+   ERW EL+
Sbjct: 598 AEPGFYQRSSEQTAAVLAQLENLQAELDKLLERWAELD 635