Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  319 bits (817), Expect = 2e-91
 Identities = 175/511 (34%), Positives = 296/511 (57%), Gaps = 3/511 (0%)

Query: 31  RVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRLEQDPPRNQAGTVFDYVSGG 90
           ++ +VG NGAGKSTLMK++AG      G+    +   V  L Q+P  +++ TV + V  G
Sbjct: 36  KIGVVGVNGAGKSTLMKIMAGLDTDFTGEAWAAEGAKVGYLPQEPKLDESLTVRENVMLG 95

Query: 91  LQGIGEQLKIYQDQLDLVATDPSESNINKLAHIQEQLEVSGAWRFEDRIKNVLGSLKLD- 149
           ++   +++  +      +A + ++  + ++  +Q+ ++    W  + +I   + +L+   
Sbjct: 96  VKAKKDKVDRFNQIAVEMAENYTDELMEEMTALQDSIDAENLWDLDSQIDISMEALRCPP 155

Query: 150 GHTKLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLDVTTIEWLEGFLKDFRGSIIFI 209
              ++ +LSGG +R+ AL + L   P++LLLDEPTNHLD  TI WL+  L D++G+I+ +
Sbjct: 156 DDAEIANLSGGERRRVALCKLLLEAPEMLLLDEPTNHLDAETIAWLQQHLIDYKGTILCV 215

Query: 210 SHDRAFIKSMATRIVDLDRGQLSSFPGDYENYLTEKEEMLRVEELQNAEFDKKLAQEEVW 269
           +HDR F+  + + I++LDRG+   + G+Y  +L +K + L  E  ++    K L +E  W
Sbjct: 216 THDRYFLDDITSWILELDRGKGIPYEGNYSAWLEQKAKRLEQEAREDKSKQKTLERELEW 275

Query: 270 IRQGIKARRTRNEGRVRALKRLRQERSERREVQGKVNLQIDDSNRSGKIVFEAENLHYSI 329
           +RQG KAR+ +++ R+ A   L  +    RE   +  + I +  R G  V E E +    
Sbjct: 276 MRQGAKARQAKSKARINAYNDLASQ--SEREKLTRAQIVIPNGPRLGSKVIEVEGISKHY 333

Query: 330 GGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQPDSGKVHCGTKLEVAYFDQ 389
           G K +V+G SF++  G  + +IGPNG GKSTL ++L G  QPD G V  G  ++++Y DQ
Sbjct: 334 GDKQLVEGLSFDLPPGGIVGVIGPNGAGKSTLFRMLTGQEQPDEGNVSYGDTVKLSYVDQ 393

Query: 390 YRELLDPEKTVIDNLADGKQEVMVGGRLRHALSYLQDFLFSPKRARTPVKALSGGEKNRL 449
            R+ L+  +TV + ++ G + + +G    ++ +Y   F F     +  +  LSGGE+NR+
Sbjct: 394 SRDDLNDNETVWEAISGGAEIIELGDAQVNSRAYCSSFNFKGGDQQKKLSLLSGGERNRV 453

Query: 450 LLARILLKANNLLVLDEPTNDLDIETLELLEELLANYQGTLLLVSHDREFVDNTVTSSWI 509
            +AR+L +  N+L+LDEPTNDLD+ETL  LE+ L ++ G  +++SHDR F+D   T    
Sbjct: 454 HMARLLKEGGNVLLLDEPTNDLDVETLRALEDALVDFAGCAVVISHDRFFLDRICTHILA 513

Query: 510 FEGDGKIEEFVGGYHDAQQQRAQVLQSRAAE 540
           FEGD  +E F G + D ++ + + L   A E
Sbjct: 514 FEGDAHVEWFEGNFEDYEEDKKRRLGPDALE 544



 Score =  112 bits (281), Expect = 3e-29
 Identities = 93/314 (29%), Positives = 151/314 (48%), Gaps = 45/314 (14%)

Query: 330 GGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQPDSGKVHCGTKLEVAYFDQ 389
           GGK   +    + + G +I ++G NG GKSTL+KI+ G     +G+       +V Y  Q
Sbjct: 19  GGKKCFENIHLSFLPGVKIGVVGVNGAGKSTLMKIMAGLDTDFTGEAWAAEGAKVGYLPQ 78

Query: 390 YRELLDPEKTVIDNL----------ADGKQEVMV------GGRLRHALSYLQDFL----- 428
               LD   TV +N+           D   ++ V         L   ++ LQD +     
Sbjct: 79  -EPKLDESLTVRENVMLGVKAKKDKVDRFNQIAVEMAENYTDELMEEMTALQDSIDAENL 137

Query: 429 --------FSPKRARTP-----VKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIET 475
                    S +  R P     +  LSGGE+ R+ L ++LL+A  +L+LDEPTN LD ET
Sbjct: 138 WDLDSQIDISMEALRCPPDDAEIANLSGGERRRVALCKLLLEAPEMLLLDEPTNHLDAET 197

Query: 476 LELLEELLANYQGTLLLVSHDREFVDNTVTSSWIFEGD-GKIEEFVGGYHDAQQQRAQVL 534
           +  L++ L +Y+GT+L V+HDR F+D+   +SWI E D GK   + G Y    +Q+A+ L
Sbjct: 198 IAWLQQHLIDYKGTILCVTHDRYFLDD--ITSWILELDRGKGIPYEGNYSAWLEQKAKRL 255

Query: 535 QSRAAENIVKK---EKVVEESPKSAPSKTKQKKLSYKLQRELEALPQRLEELEVEIAALQ 591
           +  A E+  K+   E+ +E   + A ++  + K       +L +  +R +    +I    
Sbjct: 256 EQEAREDKSKQKTLERELEWMRQGAKARQAKSKARINAYNDLASQSEREKLTRAQIV--- 312

Query: 592 DIVNSPDFFSQPVD 605
            I N P   S+ ++
Sbjct: 313 -IPNGPRLGSKVIE 325



 Score =  101 bits (251), Expect = 1e-25
 Identities = 76/245 (31%), Positives = 117/245 (47%), Gaps = 35/245 (14%)

Query: 13  FGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRLE 72
           +GD  L++   F L     V ++G NGAGKSTL ++L G+   D+G +     V +S ++
Sbjct: 333 YGDKQLVEGLSFDLPPGGIVGVIGPNGAGKSTLFRMLTGQEQPDEGNVSYGDTVKLSYVD 392

Query: 73  QD-PPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKLAHIQEQLEVSG 131
           Q     N   TV++ +SGG + I                +  ++ +N  A+        G
Sbjct: 393 QSRDDLNDNETVWEAISGGAEII----------------ELGDAQVNSRAYCSSFNFKGG 436

Query: 132 AWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLDVTT 191
                            D   KL+ LSGG + +  +AR L    +VLLLDEPTN LDV T
Sbjct: 437 -----------------DQQKKLSLLSGGERNRVHMARLLKEGGNVLLLDEPTNDLDVET 479

Query: 192 IEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLD-RGQLSSFPGDYENYLTEKEEMLR 250
           +  LE  L DF G  + ISHDR F+  + T I+  +    +  F G++E+Y  +K+  L 
Sbjct: 480 LRALEDALVDFAGCAVVISHDRFFLDRICTHILAFEGDAHVEWFEGNFEDYEEDKKRRLG 539

Query: 251 VEELQ 255
            + L+
Sbjct: 540 PDALE 544