Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., ABC transporter ATPase component (RefSeq) from Shewanella loihica PV-4

 Score =  765 bits (1976), Expect = 0.0
 Identities = 386/639 (60%), Positives = 480/639 (75%), Gaps = 4/639 (0%)

Query: 1   MALITIHNGLLAFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKM 60
           M+L+ I+NG LA+G  PLL +ADF ++  ERVC+VGRNGAGKS+LMKV+ GE+LLDDG+ 
Sbjct: 1   MSLVRINNGSLAYGYTPLLQNADFTIEPGERVCIVGRNGAGKSSLMKVIGGEVLLDDGEF 60

Query: 61  QVMQDVVVSRLEQDPPRNQAGTVFDYVSGGLQGIGEQLKIY-QDQLDLVATDPSESN--I 117
            +  DV VSRL+QDPP+ + GTV+ Y+S GLQ +GE+L+ Y Q   D+   D  E    +
Sbjct: 61  NIANDVKVSRLQQDPPKAEQGTVYAYISAGLQEVGEKLERYHQLSHDVAHVDAQEMERLL 120

Query: 118 NKLAHIQEQLEVSGAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDV 177
            ++  +Q  L+    W+ + RI      L LD    L  LSGGWQRK ALARAL  +PD+
Sbjct: 121 KQMERLQSDLDHLNGWQLDTRINQTCELLGLDADASLASLSGGWQRKVALARALVSEPDL 180

Query: 178 LLLDEPTNHLDVTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFPGD 237
           LLLDEPTNHLD+ TIEWLE FL ++RG+I+FISHDR FI+ MATRIVDLDRG ++S+PGD
Sbjct: 181 LLLDEPTNHLDIDTIEWLEEFLLNYRGAIVFISHDRGFIQRMATRIVDLDRGVVTSWPGD 240

Query: 238 YENYLTEKEEMLRVEELQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSE 297
           Y+ YL  K E LRVEE +NA+FDKKLA+EE WIRQGIKARRTRNEGRVRALK LR ER E
Sbjct: 241 YQTYLDGKAEWLRVEEEKNAQFDKKLAEEEAWIRQGIKARRTRNEGRVRALKALRMERME 300

Query: 298 RREVQGKVNLQIDDSNRSGKIVFEAENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCG 357
           R   QG   + + D+ RSGK+VF+ ++L+Y++  K +V  F+ ++MRGDRIALIGPNGCG
Sbjct: 301 RINRQGGAKMAVADTERSGKLVFDIKDLNYNLPDKNLVKNFTTSVMRGDRIALIGPNGCG 360

Query: 358 KSTLLKILLGDLQPDSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVMVGGRL 417
           KSTL+K+L+G L P SG+V  GTKLEVAYFDQYRE LDPEKTV DN+ +GK+ V + G+ 
Sbjct: 361 KSTLIKLLIGQLAPQSGEVKVGTKLEVAYFDQYREALDPEKTVEDNVGEGKKTVTINGQD 420

Query: 418 RHALSYLQDFLFSPKRARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLE 477
           RH LSYLQDFLFSP RARTPVKALSGGEKNRLLLAR+LL+  NL++LDEPTNDLDIETLE
Sbjct: 421 RHILSYLQDFLFSPMRARTPVKALSGGEKNRLLLARLLLRPANLIILDEPTNDLDIETLE 480

Query: 478 LLEELLANYQGTLLLVSHDREFVDNTVTSSWIFEGDGKIEEFVGGYHDAQQQRAQVLQSR 537
           LLE LL +YQGTLLLVSHDR F+DNTVTSSW F G+G   E+VGGY DA  Q A+     
Sbjct: 481 LLESLLTDYQGTLLLVSHDRAFIDNTVTSSWWFTGNGGWSEYVGGYQDAVSQGAKFYSEE 540

Query: 538 AAENIVKKEKVVEESPKSAPSKTK-QKKLSYKLQRELEALPQRLEELEVEIAALQDIVNS 596
                  + KV E   +   +  K +KKLSYKLQREL+ALP ++E+LE EI +LQ ++N 
Sbjct: 541 PVAKDAVQPKVAEPVKRETKAAAKAEKKLSYKLQRELDALPAKMEQLEAEIESLQAVINE 600

Query: 597 PDFFSQPVDKTQPILDKLTATEQELEIAFERWEELEAMQ 635
           PDF++Q  D     L++L   EQELE+ FERWEELEA++
Sbjct: 601 PDFYTQAQDLVSSRLNELAELEQELEVCFERWEELEALK 639