Pairwise Alignments
Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 554 a.a., putative ABC transporter ATP-binding protein (RefSeq) from Shewanella loihica PV-4
Score = 301 bits (771), Expect = 5e-86
Identities = 168/498 (33%), Positives = 285/498 (57%), Gaps = 9/498 (1%)
Query: 31 RVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRLEQDPPRNQAGTVFDYVSGG 90
++ ++G NG+GKSTL++++AG +G+ + MQD+ + L Q+P + TV + +
Sbjct: 34 KIGVLGLNGSGKSTLLRIMAGIDTEIEGEARPMQDLKIGYLPQEPKLDPQQTVREAIEEA 93
Query: 91 LQGIGEQLKIYQDQLDLVATDPSESNINKLAHIQEQLEV----SGAWRFEDRIKNVLGSL 146
+ L + L A +++ + LA Q +LE A ++ ++ +L
Sbjct: 94 VSEAKNALTRLDEVYALYAEP--DADFDALAKEQGELEAIIQAQDAHNLDNILERAANAL 151
Query: 147 KL-DGHTKLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLDVTTIEWLEGFLKDFRGS 205
+L D K+ LSGG +R+ A+ R L PD+LLLDEPTNHLD ++ WLE FL+++ G+
Sbjct: 152 RLPDWDEKIEVLSGGERRRVAICRLLLEKPDMLLLDEPTNHLDAESVAWLERFLQEYTGT 211
Query: 206 IIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYENYLTEKEEMLRVEELQNAEFDKKLAQ 265
++ I+HDR F+ + A I++LDRG+ + G+Y ++L +KE L+ E + K +A+
Sbjct: 212 VVAITHDRYFLDNAAGWILELDRGEGIPWEGNYSSWLEQKEARLKQESAAESARQKTIAK 271
Query: 266 EEVWIRQGIKARRTRNEGRVRALKRLRQERSERREVQGKVNLQIDDSNRSGKIVFEAENL 325
E W+RQG K R+++ + R+ + L ++R + L I R G V E NL
Sbjct: 272 ELEWVRQGAKGRQSKGKARMARFEELNTNDYQKRNETNE--LFIPPGPRLGDKVIEVNNL 329
Query: 326 HYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQPDSGKVHCGTKLEVA 385
S G + ++D SF++ +G + +IG NG GKSTL K++ G QPDSG + G +++A
Sbjct: 330 TKSYGDRVLIDNLSFSVPKGAIVGIIGANGAGKSTLFKMISGAEQPDSGSIEVGDTVQIA 389
Query: 386 YFDQYRELLDPEKTVIDNLADGKQEVMVGGRLRHALSYLQDFLFSPKRARTPVKALSGGE 445
+Q+R+ ++ + TV + ++ G+ + + + +Y+ F F + + LSGGE
Sbjct: 390 SVEQFRDAMNDKATVWEEISGGQDIMRINNTEIPSRAYVGRFNFRGGDQQKIIGTLSGGE 449
Query: 446 KNRLLLARILLKANNLLVLDEPTNDLDIETLELLEELLANYQGTLLLVSHDREFVDNTVT 505
+NR+ LA++L N+L+LDEPTNDLD+ETL LEE L + G +++SHDR F+D T
Sbjct: 450 RNRVHLAKLLQAGGNVLLLDEPTNDLDVETLRALEEALLEFPGCAMVISHDRWFLDRIAT 509
Query: 506 SSWIFEGDGKIEEFVGGY 523
+ +G++ + G Y
Sbjct: 510 HILDYRDEGQVNFYEGNY 527
Score = 116 bits (291), Expect = 2e-30
Identities = 84/256 (32%), Positives = 136/256 (53%), Gaps = 37/256 (14%)
Query: 3 LITIHNGLLAFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQV 62
+I ++N ++GD L+D+ F++ + V ++G NGAGKSTL K+++G D G ++V
Sbjct: 323 VIEVNNLTKSYGDRVLIDNLSFSVPKGAIVGIIGANGAGKSTLFKMISGAEQPDSGSIEV 382
Query: 63 MQDVVVSRLEQ-DPPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATD-PSESNINKL 120
V ++ +EQ N TV++ +SGG QD + + T+ PS + + +
Sbjct: 383 GDTVQIASVEQFRDAMNDKATVWEEISGG-----------QDIMRINNTEIPSRAYVGRF 431
Query: 121 AHIQEQLEVSGAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLL 180
+R D+ K ++G+L SGG + + LA+ L +VLLL
Sbjct: 432 N-----------FRGGDQQK-IIGTL-----------SGGERNRVHLAKLLQAGGNVLLL 468
Query: 181 DEPTNHLDVTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDL-DRGQLSSFPGDYE 239
DEPTN LDV T+ LE L +F G + ISHDR F+ +AT I+D D GQ++ + G+Y
Sbjct: 469 DEPTNDLDVETLRALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGQVNFYEGNYT 528
Query: 240 NYLTEKEEMLRVEELQ 255
Y T +E L + ++
Sbjct: 529 EYSTWLKETLGTDVIE 544
Score = 105 bits (261), Expect = 7e-27
Identities = 84/280 (30%), Positives = 134/280 (47%), Gaps = 46/280 (16%)
Query: 332 KTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQPDSGKVHCGTKLEVAYFDQYR 391
K I+ S + G +I ++G NG GKSTLL+I+ G G+ L++ Y Q
Sbjct: 19 KQILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGIDTEIEGEARPMQDLKIGYLPQ-E 77
Query: 392 ELLDPEKTV-------------------------------IDNLA--DGKQEVMVGGRLR 418
LDP++TV D LA G+ E ++ +
Sbjct: 78 PKLDPQQTVREAIEEAVSEAKNALTRLDEVYALYAEPDADFDALAKEQGELEAIIQAQDA 137
Query: 419 HALSYLQDFLFSPKRA---RTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIET 475
H L + + + R ++ LSGGE+ R+ + R+LL+ ++L+LDEPTN LD E+
Sbjct: 138 HNLDNILERAANALRLPDWDEKIEVLSGGERRRVAICRLLLEKPDMLLLDEPTNHLDAES 197
Query: 476 LELLEELLANYQGTLLLVSHDREFVDNTVTSSWIFEGD-GKIEEFVGGYHD-AQQQRAQV 533
+ LE L Y GT++ ++HDR F+DN + WI E D G+ + G Y +Q+ A++
Sbjct: 198 VAWLERFLQEYTGTVVAITHDRYFLDN--AAGWILELDRGEGIPWEGNYSSWLEQKEARL 255
Query: 534 LQSRAAEN-----IVKKEKVVEESPKSAPSKTKQKKLSYK 568
Q AAE+ I K+ + V + K SK K + ++
Sbjct: 256 KQESAAESARQKTIAKELEWVRQGAKGRQSKGKARMARFE 295