Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., putative ABC transporter ATP-binding protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  350 bits (898), Expect = e-100
 Identities = 192/526 (36%), Positives = 312/526 (59%), Gaps = 7/526 (1%)

Query: 14  GDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRLEQ 73
           G   +L     +     ++ ++G NG+GKS+L+K+LAG     DGK  +     +  LEQ
Sbjct: 20  GQREVLKDISLSYFYGAKIGVLGLNGSGKSSLLKILAGVDPNFDGKTVLAPGFTIGYLEQ 79

Query: 74  DPPRNQAGTVFDYVSGGLQGIGEQLKIYQDQ----LDLVATDPSESNINKLAHIQEQLEV 129
           +P  ++A TV + V  G+Q I + +K +++      + +  D  ++ I +   +QEQ++ 
Sbjct: 80  EPLVDEARTVREVVEEGVQDIVDLVKQFEEINAKFAEPMEPDEMDALIERQGKVQEQMDA 139

Query: 130 SGAWRFEDRIKNVLGSLKLD-GHTKLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLD 188
            GAW  + R++  + +L+   G T ++ +SGG +R+ AL R L   PD+LLLDEPTNHLD
Sbjct: 140 KGAWDLDARLEMAMDALRCPPGDTPVSVISGGERRRVALCRLLLQSPDILLLDEPTNHLD 199

Query: 189 VTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYENYLTEKEEM 248
             ++ WLE FL+ F G++I ++HDR F+ ++A  I++LDRG+   + G+Y ++L +KE+ 
Sbjct: 200 AESVAWLERFLQTFPGTVIAVTHDRYFLDNVAGWILELDRGRGIPWKGNYSSWLEQKEKR 259

Query: 249 LRVEELQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSERREVQGKVNLQ 308
           L+ EE    E  K L +E  WIR   K R  + + R+ A + +    SE+R     + + 
Sbjct: 260 LQQEEKSEVERQKTLQRELEWIRMSPKGRHAKGKARINAYEAMLSHESEKRAPD--LEIY 317

Query: 309 IDDSNRSGKIVFEAENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGD 368
           I    R GK+VFEA+ L  S+G + +++G  F I  G  + +IGPNG GK+TL K+L G 
Sbjct: 318 IPPGPRLGKVVFEAKGLAKSLGDRLLMEGVDFIIPAGAIVGIIGPNGAGKTTLFKMLAGV 377

Query: 369 LQPDSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVMVGGRLRHALSYLQDFL 428
             PD+G++  G  ++VA+ DQ R+ L+  KTV + +++G + V +G R  +A +Y   F 
Sbjct: 378 ETPDAGELKIGDTVQVAFVDQNRDSLEAGKTVYEVISEGYETVKLGNREVNARAYCSRFN 437

Query: 429 FSPKRARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLELLEELLANYQG 488
              +  +  V  LSGGE+NR+ LAR+L    N+++LDEPTNDLD+ T+  LE+ + N+ G
Sbjct: 438 LMGQDQQKKVDVLSGGERNRVHLARMLKSNANVILLDEPTNDLDVNTMRALEDGIENFAG 497

Query: 489 TLLLVSHDREFVDNTVTSSWIFEGDGKIEEFVGGYHDAQQQRAQVL 534
            +L++SHDR F+D   T    FEGD  +  F G Y + ++ R + L
Sbjct: 498 CVLVISHDRWFLDRIATHILAFEGDSSVVFFDGNYSEYEEDRKKRL 543



 Score =  114 bits (285), Expect = 1e-29
 Identities = 91/322 (28%), Positives = 149/322 (46%), Gaps = 51/322 (15%)

Query: 312 SNRSGKIVFEAENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQP 371
           SN   KI++    +    G + ++   S +   G +I ++G NG GKS+LLKIL G    
Sbjct: 2   SNEPDKIIYSMIRVTKRHGQREVLKDISLSYFYGAKIGVLGLNGSGKSSLLKILAGVDPN 61

Query: 372 DSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVM--------VGGR------- 416
             GK        + Y +Q   L+D  +TV + + +G Q+++        +  +       
Sbjct: 62  FDGKTVLAPGFTIGYLEQ-EPLVDEARTVREVVEEGVQDIVDLVKQFEEINAKFAEPMEP 120

Query: 417 ------------------------LRHALSYLQDFLFSPKRARTPVKALSGGEKNRLLLA 452
                                   L   L    D L  P    TPV  +SGGE+ R+ L 
Sbjct: 121 DEMDALIERQGKVQEQMDAKGAWDLDARLEMAMDALRCPP-GDTPVSVISGGERRRVALC 179

Query: 453 RILLKANNLLVLDEPTNDLDIETLELLEELLANYQGTLLLVSHDREFVDNTVTSSWIFEG 512
           R+LL++ ++L+LDEPTN LD E++  LE  L  + GT++ V+HDR F+DN   + WI E 
Sbjct: 180 RLLLQSPDILLLDEPTNHLDAESVAWLERFLQTFPGTVIAVTHDRYFLDN--VAGWILEL 237

Query: 513 D-GKIEEFVGGYHDAQQQRAQVLQSRAAENIVKKEKVVEE------SPKSAPSKTKQKKL 565
           D G+   + G Y    +Q+ + LQ      + +++ +  E      SPK   +K K +  
Sbjct: 238 DRGRGIPWKGNYSSWLEQKEKRLQQEEKSEVERQKTLQRELEWIRMSPKGRHAKGKARIN 297

Query: 566 SYKLQRELEALPQRLEELEVEI 587
           +Y+     E+  +R  +LE+ I
Sbjct: 298 AYEAMLSHES-EKRAPDLEIYI 318



 Score =  105 bits (262), Expect = 5e-27
 Identities = 77/240 (32%), Positives = 125/240 (52%), Gaps = 35/240 (14%)

Query: 12  AFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRL 71
           + GD  L++  DF +     V ++G NGAGK+TL K+LAG    D G++++   V V+ +
Sbjct: 337 SLGDRLLMEGVDFIIPAGAIVGIIGPNGAGKTTLFKMLAGVETPDAGELKIGDTVQVAFV 396

Query: 72  EQDPPRNQAG-TVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKLAHIQEQLEVS 130
           +Q+    +AG TV++ +S G     E +K+                +N  A+        
Sbjct: 397 DQNRDSLEAGKTVYEVISEGY----ETVKL------------GNREVNARAYCS------ 434

Query: 131 GAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLDVT 190
              RF     N++G    D   K+  LSGG + +  LAR L  + +V+LLDEPTN LDV 
Sbjct: 435 ---RF-----NLMGQ---DQQKKVDVLSGGERNRVHLARMLKSNANVILLDEPTNDLDVN 483

Query: 191 TIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLD-RGQLSSFPGDYENYLTEKEEML 249
           T+  LE  +++F G ++ ISHDR F+  +AT I+  +    +  F G+Y  Y  ++++ L
Sbjct: 484 TMRALEDGIENFAGCVLVISHDRWFLDRIATHILAFEGDSSVVFFDGNYSEYEEDRKKRL 543