Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  738 bits (1905), Expect = 0.0
 Identities = 373/640 (58%), Positives = 479/640 (74%), Gaps = 5/640 (0%)

Query: 1   MALITIHNGLLAFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKM 60
           M+L+ I+NG LA+G  PLL +ADF ++  ERVC+VGRNGAGKS+L+K+L+G++LLD+G+ 
Sbjct: 1   MSLVRINNGSLAYGYTPLLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEF 60

Query: 61  QVMQDVVVSRLEQDPPRNQAGTVFDYVSGGLQGIGEQLKIY-QDQLDLVATDPS--ESNI 117
            +   V VSRL+QDPP+ + GTV+ Y++ GL+ +GE L+ Y Q   D+   +P   E  +
Sbjct: 61  NIDGSVTVSRLQQDPPKAEQGTVYAYIAAGLKEVGEALEQYHQLSHDVAFAEPEQMERML 120

Query: 118 NKLAHIQEQLEVSGAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDV 177
           N++  +QE L+    W+ + RI      L LD    L++LSGGWQRK ALARAL   PD+
Sbjct: 121 NQMQKLQETLDHHNGWQLDSRINQNCELLGLDPDKSLSELSGGWQRKVALARALVSAPDL 180

Query: 178 LLLDEPTNHLDVTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFPGD 237
           LLLDEPTNHLD+ TIEWLE FL DF+G+I+FISHDR FI  MATRIVDLDRG ++S+PG+
Sbjct: 181 LLLDEPTNHLDIDTIEWLEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWPGN 240

Query: 238 YENYLTEKEEMLRVEELQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSE 297
           Y+ YL  K+E LRVE  +NA FDK+LA EEVWIRQG+KARRTRNEGRVRALK LRQERSE
Sbjct: 241 YQAYLDGKQEWLRVEAEKNALFDKRLADEEVWIRQGVKARRTRNEGRVRALKALRQERSE 300

Query: 298 RREVQGKVNLQIDDSNRSGKIVFEAENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCG 357
           R   QG   + + D+ RSGK+VF+ ++L+Y++  K +V  F+  ++RGDRIALIGPNGCG
Sbjct: 301 RLNRQGNAKMAVADTERSGKLVFDVKDLNYNLPDKNLVKNFNTTVLRGDRIALIGPNGCG 360

Query: 358 KSTLLKILLGDLQPDSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVMVGGRL 417
           KSTL+K+L+  LQP SG+V  GTKLE+AYFDQYRE LDPE+TV DN+ +GK+ + + G+ 
Sbjct: 361 KSTLIKLLIEKLQPQSGEVKVGTKLEIAYFDQYREALDPEQTVEDNVGEGKKTITINGQD 420

Query: 418 RHALSYLQDFLFSPKRARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLE 477
           RH LSYLQDFLFSP RARTPVKALSGGEKNRLLLA++L++  NL++LDEPTNDLDIETLE
Sbjct: 421 RHILSYLQDFLFSPMRARTPVKALSGGEKNRLLLAKLLIRPANLIILDEPTNDLDIETLE 480

Query: 478 LLEELLANYQGTLLLVSHDREFVDNTVTSSWIFEGDGKIEEFVGGYHDAQQQRAQVLQSR 537
           LLE LL  Y+GTLLLVSHDR F+DNTVTSSW + G+G   E+VGGY DA  Q A+     
Sbjct: 481 LLESLLTEYEGTLLLVSHDRAFIDNTVTSSWWYAGNGHWTEYVGGYQDAIDQGAKFYSEE 540

Query: 538 AAE-NIVKKEKVVEESP-KSAPSKTKQKKLSYKLQRELEALPQRLEELEVEIAALQDIVN 595
            ++ N V+     + +  K A      KKLSYK QRELEA+P+ +E+LE EI  LQ  V 
Sbjct: 541 PSQTNTVEAPATAKTAEVKVAEPAKAAKKLSYKFQRELEAMPELMEKLEAEILELQTTVA 600

Query: 596 SPDFFSQPVDKTQPILDKLTATEQELEIAFERWEELEAMQ 635
           SPDF+SQ  DK   +L  L   E++LE+ FERWEELE+++
Sbjct: 601 SPDFYSQTQDKINQVLSLLADKEKQLEVCFERWEELESLK 640