Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  351 bits (901), Expect = e-101
 Identities = 194/522 (37%), Positives = 307/522 (58%), Gaps = 7/522 (1%)

Query: 14  GDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRLEQ 73
           G   +L     +     ++ ++G NG+GKS+L+K+LAG     DGK  +     +  LEQ
Sbjct: 20  GQREVLKDISLSYFYGAKIGVLGLNGSGKSSLLKILAGVDQNFDGKTVLAPGFTIGYLEQ 79

Query: 74  DPPRNQAGTVFDYVSGGLQGIGEQLKIYQDQ----LDLVATDPSESNINKLAHIQEQLEV 129
           +P  ++  TV + V  G+Q I + +K +++      D +  D  ++ I +   +QEQ++ 
Sbjct: 80  EPLVDETRTVREVVEEGVQDIVDLVKEFEEINARFADPMEPDEMDALIERQGKVQEQMDA 139

Query: 130 SGAWRFEDRIKNVLGSLKLD-GHTKLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLD 188
            GAW  + R++  + +L+   G T ++ +SGG +R+ AL R L  +PD+LLLDEPTNHLD
Sbjct: 140 KGAWDLDARLEMAMDALRCPAGDTPVSVISGGERRRVALCRLLLQNPDILLLDEPTNHLD 199

Query: 189 VTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYENYLTEKEEM 248
             ++ WLE FL+ F G++I ++HDR F+ ++A  I++LDRG+   + G+Y ++L +KE+ 
Sbjct: 200 AESVAWLERFLQGFPGTVIAVTHDRYFLDNVAGWILELDRGRGIPWKGNYSSWLEQKEKR 259

Query: 249 LRVEELQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSERREVQGKVNLQ 308
           L  E+   AE  K L +E  WIR   K R  + + R+ A + +    SE+R     + + 
Sbjct: 260 LANEDKAEAERQKTLKRELEWIRMSPKGRHAKGKARINAYEAMLSHESEKRAPD--LEIY 317

Query: 309 IDDSNRSGKIVFEAENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGD 368
           I    R GK V EA+ +  S+G K +++G    I  G  + ++GPNG GK+TL KI+ G 
Sbjct: 318 IPPGPRLGKKVIEAQGVSKSMGDKMLIEGLECIIPAGAIVGIVGPNGAGKTTLFKIIAGL 377

Query: 369 LQPDSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVMVGGRLRHALSYLQDFL 428
            QPD+G +  G  +++AY DQ RE L P KTV + ++DG   V +G R  +A +Y   F 
Sbjct: 378 EQPDAGTLTVGDTVKLAYVDQNRESLTPGKTVYELISDGYDTVKLGTREVNARAYCSRFN 437

Query: 429 FSPKRARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLELLEELLANYQG 488
           F  +  +  V  LSGGE+NRL +AR+L +  N+++LDEPTNDLD+ T+  LE+ + N+ G
Sbjct: 438 FMGQDQQKKVDVLSGGERNRLHVARMLKEGANVILLDEPTNDLDVNTMRALEDGIENFAG 497

Query: 489 TLLLVSHDREFVDNTVTSSWIFEGDGKIEEFVGGYHDAQQQR 530
            +L++SHDR F+D   T    FEGD K+  F G Y +    R
Sbjct: 498 VVLVISHDRWFLDRLATHILAFEGDSKVVFFEGNYSEYDADR 539



 Score =  112 bits (281), Expect = 3e-29
 Identities = 91/322 (28%), Positives = 150/322 (46%), Gaps = 51/322 (15%)

Query: 312 SNRSGKIVFEAENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQP 371
           SN   KI++    +    G + ++   S +   G +I ++G NG GKS+LLKIL G  Q 
Sbjct: 2   SNEPDKIIYSMIRVTKRHGQREVLKDISLSYFYGAKIGVLGLNGSGKSSLLKILAGVDQN 61

Query: 372 DSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVM--------VGGR------- 416
             GK        + Y +Q   L+D  +TV + + +G Q+++        +  R       
Sbjct: 62  FDGKTVLAPGFTIGYLEQ-EPLVDETRTVREVVEEGVQDIVDLVKEFEEINARFADPMEP 120

Query: 417 ------------------------LRHALSYLQDFLFSPKRARTPVKALSGGEKNRLLLA 452
                                   L   L    D L  P    TPV  +SGGE+ R+ L 
Sbjct: 121 DEMDALIERQGKVQEQMDAKGAWDLDARLEMAMDALRCP-AGDTPVSVISGGERRRVALC 179

Query: 453 RILLKANNLLVLDEPTNDLDIETLELLEELLANYQGTLLLVSHDREFVDNTVTSSWIFEG 512
           R+LL+  ++L+LDEPTN LD E++  LE  L  + GT++ V+HDR F+DN   + WI E 
Sbjct: 180 RLLLQNPDILLLDEPTNHLDAESVAWLERFLQGFPGTVIAVTHDRYFLDN--VAGWILEL 237

Query: 513 D-GKIEEFVGGYHDAQQQRAQVL------QSRAAENIVKKEKVVEESPKSAPSKTKQKKL 565
           D G+   + G Y    +Q+ + L      ++   + + ++ + +  SPK   +K K +  
Sbjct: 238 DRGRGIPWKGNYSSWLEQKEKRLANEDKAEAERQKTLKRELEWIRMSPKGRHAKGKARIN 297

Query: 566 SYKLQRELEALPQRLEELEVEI 587
           +Y+     E+  +R  +LE+ I
Sbjct: 298 AYEAMLSHES-EKRAPDLEIYI 318



 Score = 90.1 bits (222), Expect = 2e-22
 Identities = 73/240 (30%), Positives = 114/240 (47%), Gaps = 35/240 (14%)

Query: 12  AFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRL 71
           + GD  L++  +  +     V +VG NGAGK+TL K++AG    D G + V   V ++ +
Sbjct: 337 SMGDKMLIEGLECIIPAGAIVGIVGPNGAGKTTLFKIIAGLEQPDAGTLTVGDTVKLAYV 396

Query: 72  EQDPPRNQAG-TVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKLAHIQEQLEVS 130
           +Q+      G TV++ +S G               D V     E N              
Sbjct: 397 DQNRESLTPGKTVYELISDG--------------YDTVKLGTREVNARAYCS-------- 434

Query: 131 GAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLDVT 190
              RF     N +G    D   K+  LSGG + +  +AR L    +V+LLDEPTN LDV 
Sbjct: 435 ---RF-----NFMGQ---DQQKKVDVLSGGERNRLHVARMLKEGANVILLDEPTNDLDVN 483

Query: 191 TIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLD-RGQLSSFPGDYENYLTEKEEML 249
           T+  LE  +++F G ++ ISHDR F+  +AT I+  +   ++  F G+Y  Y  +++  L
Sbjct: 484 TMRALEDGIENFAGVVLVISHDRWFLDRLATHILAFEGDSKVVFFEGNYSEYDADRKARL 543