Pairwise Alignments
Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 555 a.a., putative ABC transporter ATP-binding protein (RefSeq) from Shewanella sp. ANA-3
Score = 296 bits (757), Expect = 2e-84
Identities = 168/502 (33%), Positives = 287/502 (57%), Gaps = 17/502 (3%)
Query: 31 RVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRLEQDPPRNQAGTVFDYVSGG 90
++ ++G NG+GKSTL++++AG +G+ + M + + L Q+P + TV + +
Sbjct: 34 KIGVLGLNGSGKSTLLRIMAGIDTEIEGEARPMPGLKIGYLPQEPKLDPTQTVREAIEEA 93
Query: 91 LQGIGEQLKIYQDQLDLVATDPSESNINKLAHIQEQLEV----SGAWRFEDRIKNVLGSL 146
+ LK D++ DP +++ + LA Q +LE A ++ ++ +L
Sbjct: 94 VSEAKNALKRL-DEVYAAYADP-DADFDALAKEQGELEAIIQAQDAHNLDNILERAANAL 151
Query: 147 KL-DGHTKLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLDVTTIEWLEGFLKDFRGS 205
+L D K+ LSGG +R+ A+ R L P++LLLDEPTNHLD ++ WLE FL+++ G+
Sbjct: 152 RLPDWDEKIEVLSGGERRRVAICRLLLEKPEMLLLDEPTNHLDAESVAWLEHFLQEYSGT 211
Query: 206 IIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYENYLTEKEEMLRVEELQNAEFDKKLAQ 265
++ I+HDR F+ + A I++LDRG+ + G+Y ++L +K+ L+ E + K +A+
Sbjct: 212 VVAITHDRYFLDNAAGWILELDRGEGIPWEGNYSSWLEQKDARLKQESAAESARQKTIAK 271
Query: 266 EEVWIRQGIKARRTRNEGRVRALKRLR----QERSERREVQGKVNLQIDDSNRSGKIVFE 321
E W+RQG K R+++ + R+ + L Q+R+E E L I R G V E
Sbjct: 272 ELEWVRQGAKGRQSKGKARMARFEELNTTDYQKRNETNE------LFIPPGPRLGDKVIE 325
Query: 322 AENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQPDSGKVHCGTK 381
NL S G + ++D SF+I +G + +IG NG GKSTL ++L G QPDSG + G
Sbjct: 326 VNNLTKSYGDRVLIDNLSFSIPKGAIVGIIGANGAGKSTLFRMLSGSEQPDSGTIELGET 385
Query: 382 LEVAYFDQYRELLDPEKTVIDNLADGKQEVMVGGRLRHALSYLQDFLFSPKRARTPVKAL 441
+++A +Q+R+ ++ + T+ ++ G+ + + + +Y+ F F + + L
Sbjct: 386 VQLASVEQFRDSMNDKNTIWQEISGGQDIMRINNMEIPSRAYVGRFNFRGADQQKVIGTL 445
Query: 442 SGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLELLEELLANYQGTLLLVSHDREFVD 501
SGGE+NR+ LA++L N+L+LDEPTNDLD+ETL LEE + + G +++SHDR F+D
Sbjct: 446 SGGERNRVHLAKLLQAGGNVLLLDEPTNDLDVETLRALEEAILEFPGCAMVISHDRWFLD 505
Query: 502 NTVTSSWIFEGDGKIEEFVGGY 523
T + +G++ + G Y
Sbjct: 506 RIATHILDYRDEGQVNFYEGNY 527
Score = 108 bits (270), Expect = 6e-28
Identities = 77/241 (31%), Positives = 129/241 (53%), Gaps = 35/241 (14%)
Query: 3 LITIHNGLLAFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQV 62
+I ++N ++GD L+D+ F++ + V ++G NGAGKSTL ++L+G D G +++
Sbjct: 323 VIEVNNLTKSYGDRVLIDNLSFSIPKGAIVGIIGANGAGKSTLFRMLSGSEQPDSGTIEL 382
Query: 63 MQDVVVSRLEQ-DPPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKLA 121
+ V ++ +EQ N T++ +SGG + ++I ++ PS + + +
Sbjct: 383 GETVQLASVEQFRDSMNDKNTIWQEISGG----QDIMRINNMEI------PSRAYVGRF- 431
Query: 122 HIQEQLEVSGAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLLD 181
+R D+ K V+G+ LSGG + + LA+ L +VLLLD
Sbjct: 432 ----------NFRGADQQK-VIGT-----------LSGGERNRVHLAKLLQAGGNVLLLD 469
Query: 182 EPTNHLDVTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDL-DRGQLSSFPGDYEN 240
EPTN LDV T+ LE + +F G + ISHDR F+ +AT I+D D GQ++ + G+Y
Sbjct: 470 EPTNDLDVETLRALEEAILEFPGCAMVISHDRWFLDRIATHILDYRDEGQVNFYEGNYTE 529
Query: 241 Y 241
Y
Sbjct: 530 Y 530
Score = 102 bits (255), Expect = 3e-26
Identities = 84/280 (30%), Positives = 132/280 (47%), Gaps = 46/280 (16%)
Query: 332 KTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQPDSGKVHCGTKLEVAYFDQYR 391
K I+ S + G +I ++G NG GKSTLL+I+ G G+ L++ Y Q
Sbjct: 19 KQILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGIDTEIEGEARPMPGLKIGYLPQ-E 77
Query: 392 ELLDPEKTV-------------------------------IDNLA--DGKQEVMVGGRLR 418
LDP +TV D LA G+ E ++ +
Sbjct: 78 PKLDPTQTVREAIEEAVSEAKNALKRLDEVYAAYADPDADFDALAKEQGELEAIIQAQDA 137
Query: 419 HALSYLQDFLFSPKRA---RTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIET 475
H L + + + R ++ LSGGE+ R+ + R+LL+ +L+LDEPTN LD E+
Sbjct: 138 HNLDNILERAANALRLPDWDEKIEVLSGGERRRVAICRLLLEKPEMLLLDEPTNHLDAES 197
Query: 476 LELLEELLANYQGTLLLVSHDREFVDNTVTSSWIFEGD-GKIEEFVGGYHD-AQQQRAQV 533
+ LE L Y GT++ ++HDR F+DN + WI E D G+ + G Y +Q+ A++
Sbjct: 198 VAWLEHFLQEYSGTVVAITHDRYFLDN--AAGWILELDRGEGIPWEGNYSSWLEQKDARL 255
Query: 534 LQSRAAEN-----IVKKEKVVEESPKSAPSKTKQKKLSYK 568
Q AAE+ I K+ + V + K SK K + ++
Sbjct: 256 KQESAAESARQKTIAKELEWVRQGAKGRQSKGKARMARFE 295