Pairwise Alignments

Query, 172 a.a., beta-hydroxydecanoyl-ACP dehydratase from Vibrio cholerae E7946 ATCC 55056

Subject, 1899 a.a., omega-3 polyunsaturated fatty acid synthase PfaC (RefSeq) from Shewanella amazonensis SB2B

 Score = 67.4 bits (163), Expect = 1e-15
 Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 7/141 (4%)

Query: 35   LMMDRITKMSETEGEFGKGLILAELDITPDLWFFDCHFPGDPVMPGCLGLDAMWQLVGFF 94
            LM++ ++K+    G +G GLI     + PD W+F CHF  D VM G L  +   QL+ F+
Sbjct: 1283 LMIEEVSKVDVQGGAWGLGLIEGHKQLEPDHWYFPCHFKDDQVMAGSLMAEGCGQLLQFY 1342

Query: 95   LGWVG-------GKGKGRALGVGEVKFTGQILPTAKKVTYEINMKRVVNRKLVMGLADGR 147
            +  +G       G+ +       +V+  GQ+LP + ++TY + +  +         A+  
Sbjct: 1343 MLHLGLHKLTQNGRFQPLKDAPQKVRCRGQVLPQSNRLTYRMEVTDIGLTPSPWAKANIE 1402

Query: 148  VLVDGKEIYVAKDLKVGLFQD 168
            +++DGK +   ++L V L +D
Sbjct: 1403 IILDGKVVVDFQNLGVMLKED 1423



 Score = 63.2 bits (152), Expect = 2e-14
 Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)

Query: 23   GEGYPQLPAPNMLMMDRITKMSETEGEFGKGLILAELDITPDLWFFDCHFPGDPVMPGCL 82
            G+ + +LP   +  +D++  +    G+ G G +  E +I P  WFF  HF  DPVMPG L
Sbjct: 1748 GKPHLRLPGGRLNFVDKVD-IVRAGGKAGLGYVYGERNIDPSDWFFRFHFHQDPVMPGSL 1806

Query: 83   GLDAMWQLVGFFLGWVGGKGK-------GRALGVGEVKFTGQILPTAKKVTYEINMKRVV 135
            G++A+ +L+  F     G G           L   + K+ GQI P  K+++ E+++  + 
Sbjct: 1807 GVEAIIELLSSF-ALDSGLGNEFANPRFNHCLSRVKWKYRGQISPLNKQMSLELHVTAIE 1865

Query: 136  NRKLVMGL-ADGRVLVDGKEIYVAKDLKVGL 165
                 + L AD  +  DG  IY   DL + +
Sbjct: 1866 RETGRVTLKADAWLAKDGLRIYEISDLALAI 1896



 Score = 28.5 bits (62), Expect = 7e-04
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 12/65 (18%)

Query: 12   DLLASSQGEL---FGEGYP---------QLPAPNMLMMDRITKMSETEGEFGKGLILAEL 59
            DL+  ++G++   FG  Y          +LP  + L++ R+TK+    GE+    +  E 
Sbjct: 1037 DLVQYAEGDIAPVFGPDYAIIDSYKRRVRLPTTDYLLVSRVTKLDAKLGEYKPSTMTTEY 1096

Query: 60   DITPD 64
            DI  D
Sbjct: 1097 DIPLD 1101