Pairwise Alignments

Query, 598 a.a., Lon protease family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., hypothetical ATP-dependent protease (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  271 bits (692), Expect = 7e-77
 Identities = 169/449 (37%), Positives = 251/449 (55%), Gaps = 32/449 (7%)

Query: 140 SEILGQVKVEHGGLVHKTSGYLEQANGGYLIVSANLLLANPRYWP------TVKAAVLGE 193
           S++LG++ V+ G      +G L + +  Y+ + A  L      W       T K   +  
Sbjct: 124 SDLLGRM-VQSGNSSKYQAGALAECH--YVFICAESLWKREGLWDLLMQILTQKEYQISH 180

Query: 194 TVSPINCDPKSPLPNRLGSSYDVKLIVVGDRTQLGDLDFLDADIHSGLCLFSELELDLKI 253
            +SPI      PL        + K+I++G       +   D        L +EL  +L +
Sbjct: 181 NLSPI------PL--------NCKIILIGAGLIYSQIRSEDWQFQRHFNLLAELAGELDL 226

Query: 254 EEETIEDYLGYLRWLCEQYNLPSLTCSAIQSLMTAGARYTEDQYYAPLCLMWHRALLEEA 313
                  Y  +L+ + +  +  +L  S++  L    AR TE Q    L ++    L+ +A
Sbjct: 227 TRFKEAQYASWLQTVAQNVDA-TLEQSSLAPLFRHSARLTEHQRRLSLSMLDLAQLMAQA 285

Query: 314 RLESEEPLIDAEHIEIALDKRYLRESYLPERALDDILDGQVIIETQGEQVGQVNGLTVIE 373
           ++   +  I+A  IE AL +   R +   E +     D  + + T+G  VGQ+NGLTVI+
Sbjct: 286 KVYRGKSTINAASIERALSQANYRHNSSEEFSGQSFDDNFINLPTEGAMVGQINGLTVID 345

Query: 374 VTGHPMPYGEPARISCVIHFGDGDIADVERKVELGGNLHAKGMMIMQAFVSSALNLDGSL 433
              H   YGEPARI+  +H+GDG++AD+ERK ELGGN+HAKGMMI+ A +      D  L
Sbjct: 346 AIDHC--YGEPARITATVHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRDAPL 403

Query: 434 PFSASIVFEQSYSEVDGDSASLAELCSLVSALSEYPIDQQIAVTGAVDQFGRVQAVGGLN 493
             +A+IVFEQSY E+DGDSASLAE C L+SA++E PI Q +A+TGA+DQFG VQA+GG+N
Sbjct: 404 HLNANIVFEQSYQEIDGDSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGIN 463

Query: 494 EKIEGFYRVCCHQGLTGEQGVILPSSNLKHLALHKSVVESIKNGEFNIWPVSTVDEAIPL 553
           EKIEGF+ +C  +GLTG+QGVI+P SN+  L LH  V+ ++  G F+I+ +  +DEA+ L
Sbjct: 464 EKIEGFFNLCERRGLTGKQGVIMPKSNMLQLNLHSKVITAVGKGLFHIYAIEHMDEAVEL 523

Query: 554 LMGKPFRGEDED------SVIAKIAERID 576
           LM  P    DED      S+   + +R+D
Sbjct: 524 LMQMPAGVADEDNDFPAESLYGLVQQRLD 552