Pairwise Alignments

Query, 598 a.a., Lon protease family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., ATP-dependent protease (RefSeq) from Shewanella sp. ANA-3

 Score =  272 bits (695), Expect = 3e-77
 Identities = 166/443 (37%), Positives = 251/443 (56%), Gaps = 20/443 (4%)

Query: 140 SEILGQVKVEHGGLVHKTSGYLEQANGGYLIVSANLLLANPRYWPTVKAAVLGETVSPIN 199
           +++LG++     G  ++  G L Q +  Y+ + A  L      W  V   +  ++    N
Sbjct: 129 ADLLGRMVQSANGSKYQP-GALAQCH--YVFICAESLWKREGLWDLVMQILTQKSYQISN 185

Query: 200 CDPKSPLPNRLGSSYDVKLIVVGDRTQLGDLDFLDADIHSGLCLFSELELDLKIEEETIE 259
               SP+P       + K+I++G       +   D        L +EL  +L +      
Sbjct: 186 --HLSPIP------LNCKIILIGAGLIYSQVRSEDWQFQRHFSLLAELASELDLTRFKEV 237

Query: 260 DYLGYLRWLCEQYNLPSLTCSAIQSLMTAGARYTEDQYYAPLCLMWHRALLEEARLESEE 319
            Y  +L+ + +   +  L  S++  L    +R TE Q    L ++    L+ +A++   +
Sbjct: 238 QYANWLQAVAQSVEV-GLEQSSLAPLFRYSSRLTEHQRRLSLSMLDFAQLMAQAKVYRGK 296

Query: 320 PLIDAEHIEIALDKRYLRESYLPERALDDILDGQVIIETQGEQVGQVNGLTVIEVTGHPM 379
             I+A  +E AL++   R +   E +     D  + + T+G  VGQ+NGLTVI+   H  
Sbjct: 297 ATINAASVEHALEQANYRHNSSEEFSGQSFDDNFINLPTEGAMVGQINGLTVIDAIDHS- 355

Query: 380 PYGEPARISCVIHFGDGDIADVERKVELGGNLHAKGMMIMQAFVSSALNLDGSLPFSASI 439
            YGEPARI+  +H+GDG++AD+ERK ELGGN+HAKGMMI+ A +      D  L  +A+I
Sbjct: 356 -YGEPARITATVHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRDAPLHLNANI 414

Query: 440 VFEQSYSEVDGDSASLAELCSLVSALSEYPIDQQIAVTGAVDQFGRVQAVGGLNEKIEGF 499
           VFEQSY E+DGDSASLAE C L+SA++E PI Q +A+TGA+DQFG VQA+GG+NEKIEGF
Sbjct: 415 VFEQSYQEIDGDSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINEKIEGF 474

Query: 500 YRVCCHQGLTGEQGVILPSSNLKHLALHKSVVESIKNGEFNIWPVSTVDEAIPLLMGKP- 558
           + +C  +GLTGEQGVI+P SN+  L L   V+ ++  G+F+I+ +  +DEA+ LLM  P 
Sbjct: 475 FNLCERRGLTGEQGVIMPKSNVLQLNLAPKVITAVGKGQFHIYAIEHMDEAVELLMQMPA 534

Query: 559 -FRGED----EDSVIAKIAERID 576
               ED    EDS+   + ER+D
Sbjct: 535 GVANEDNDFPEDSLYGLVQERLD 557