Pairwise Alignments
Query, 4558 a.a., multifunctional autoprocessing toxin RtxA from Vibrio cholerae E7946 ATCC 55056
Subject, 344 a.a., putative outer membrane secretion protein-like protein from Azospirillum brasilense Sp245
Score = 73.2 bits (178), Expect = 1e-16
Identities = 60/188 (31%), Positives = 82/188 (43%), Gaps = 16/188 (8%)
Query: 4235 TGKSNIFTGGEGNDM---GVLMGRENMMFGGDGNDTAVVAGRINHVFLGAGDDQSFVFGE 4291
TG GG G + + G +FGG G DT V A N + GAG++Q G
Sbjct: 100 TGTGQTLIGGSGGQLLGTSTVAGASATIFGGSGADTVVAAAGNNVLTAGAGNNQIHAIGG 159
Query: 4292 GGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGND-FANIFGNYNRIN 4350
+I +G D V +G + G + G NN + G GN A+ GN N I
Sbjct: 160 NNQI-FAAGNDTVFAAGGNATIGAGTGNSQLLITGGNNLIAGGQGNTTIASAAGN-NTIF 217
Query: 4351 AGAGNDVVKLMGYHAVLNGGDGDDHLI-ATAISKFSQFNGGEGRDLMVLGGYQNTFKGGT 4409
G+GN + GG G+D LI +TA S + G +G D ++ G +T GG
Sbjct: 218 GGSGNTTIA---------GGAGNDLLIGSTAKSGKAVIGGFDGNDTIIGGVGNDTLFGGA 268
Query: 4410 DVDSFVVS 4417
D FV S
Sbjct: 269 GNDIFVFS 276
Score = 66.2 bits (160), Expect = 2e-14
Identities = 80/322 (24%), Positives = 122/322 (37%), Gaps = 66/322 (20%)
Query: 4119 VADGNTETAETQDRAFGFNS---LNLPNLFATIFSQDKQKEMKSLVENLKQNLTADLLNM 4175
V + N TA T A N+ + A + D ++ K +V ++ TA +LN
Sbjct: 11 VTNNNVSTASTLAGAILKNTSLVATTADTKALVLGDDALQQNKGVVALSSESNTALVLNT 70
Query: 4176 KEKTFDFLRNSGHLQGDGDINISLGN--------------YNFNWGGDGKDLGA--YLGD 4219
+ L G G+ N+ + N G G+ LG G
Sbjct: 71 SNA-------ATLLGGAGNNNVLVANDAAGTVLQAGTGTGQTLIGGSGGQLLGTSTVAGA 123
Query: 4220 NNNFWGGRGDDVFYATGKSNIFTGGEGNDMGVLMGRENMMFGGDGNDTAVVAGRINHVFL 4279
+ +GG G D A +N+ T G GN+ +G N +F
Sbjct: 124 SATIFGGSGADTVVAAAGNNVLTAGAGNNQIHAIGGNNQIF------------------- 164
Query: 4280 GAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDF 4339
AG+D F G I G+G ++ +G N + G + NN + G+GN
Sbjct: 165 AAGNDTVFAAGGNATIGAGTGNSQLLITGGNNLIAGGQGNTTIASAAGNNTIFGGSGN-- 222
Query: 4340 ANIFGNYNRINAGAGNDVV---KLMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRDLM 4396
I GAGND++ AV+ G DG+D +I + + F GG G D+
Sbjct: 223 -------TTIAGGAGNDLLIGSTAKSGKAVIGGFDGNDTIIG-GVGNDTLF-GGAGNDIF 273
Query: 4397 ----VLGGYQNT---FKGGTDV 4411
V GG ++ FK GTD+
Sbjct: 274 VFSTVFGGGKHVIGDFKAGTDL 295
Score = 60.8 bits (146), Expect = 6e-13
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 4194 DINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKSNIFTGGEGNDMGVLM 4253
D ++ N G G + +G NN + D VF A G + I G GN ++
Sbjct: 134 DTVVAAAGNNVLTAGAGNNQIHAIGGNNQIFAAGNDTVFAAGGNATI-GAGTGNSQLLIT 192
Query: 4254 GRENMMFGGDGNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRV 4313
G N++ GG GN T A N +F G+G + + G G ++ GS T+ + V
Sbjct: 193 GGNNLIAGGQGNTTIASAAGNNTIFGGSG-NTTIAGGAGNDLLIGS------TAKSGKAV 245
Query: 4314 DTGDDQDYSVTIG-NNNQVELGAGND---FANIFGNYNRI--NAGAGNDVVKLMGY 4363
G D + ++ G N+ + GAGND F+ +FG + + AG D++ + GY
Sbjct: 246 IGGFDGNDTIIGGVGNDTLFGGAGNDIFVFSTVFGGGKHVIGDFKAGTDLIAVQGY 301
Score = 58.9 bits (141), Expect = 2e-12
Identities = 87/338 (25%), Positives = 124/338 (36%), Gaps = 34/338 (10%)
Query: 766 TSGMLGGANVITHISNDDQLSNTTAVALGGANILTKKGKGNTLAVMGGGANVLTHVGDGT 825
T+ L GA ++ + S ++T A+ LG + KG + + +N +
Sbjct: 18 TASTLAGA-ILKNTSLVATTADTKALVLGDDALQQNKG----VVALSSESNTALVLNTSN 72
Query: 826 TTGVMVGGANILTKVGNGDTTGILL----GVGNVLTHVGDGQTLGVMGAAGNIFTKVGDG 881
++ G N V N D G +L G G L GQ LG AG T G
Sbjct: 73 AATLLGGAGNNNVLVAN-DAAGTVLQAGTGTGQTLIGGSGGQLLGTSTVAGASATIFGGS 131
Query: 882 TSIAVMIGAGNIFTHVGEGNAWALMGGLGNVFTKVGNGDALALMVAEANVFTHIGDGMSV 941
+ V+ AGN G GN G N GN A A N G G S
Sbjct: 132 GADTVVAAAGNNVLTAGAGNNQIHAIGGNNQIFAAGNDTVFA---AGGNATIGAGTGNSQ 188
Query: 942 ALMLAKGNVATKVGNGTTLAAMVGNVNIFTHIGHGSTFAAMIGQANIMTKVGNDLTAALM 1001
L+ N+ TT+A+ GN IF G G+T I GND L+
Sbjct: 189 LLITGGNNLIAGGQGNTTIASAAGNNTIFG--GSGNT--------TIAGGAGND----LL 234
Query: 1002 VGKANIMTHVGDGTSLGLFAGEVNVMTKVGNGTTLAAMFGKANIMTHVGDGLTGVLALGE 1061
+G T +G F G ++ VGN T + + V G G +G+
Sbjct: 235 IGS----TAKSGKAVIGGFDGNDTIIGGVGNDTLFGGAGNDIFVFSTVFGG--GKHVIGD 288
Query: 1062 ANIVTKL-GDDFMGVVAAAKANVVTHVGDATTAAVLAG 1098
T L G+ AA A+ VT G ++ ++ G
Sbjct: 289 FKAGTDLIAVQGYGLTAAQVASRVTVTGGSSVLSLSDG 326
Score = 57.8 bits (138), Expect = 5e-12
Identities = 73/244 (29%), Positives = 98/244 (40%), Gaps = 26/244 (10%)
Query: 654 GAGLANVLVHQSEQGKMDVYAGGAVNVLVRLGDGQYL-AHLLAYGNISVQKGSGDSRVVM 712
GAG NVLV G + G L+ GQ L +A + ++ GSG VV
Sbjct: 79 GAGNNNVLVANDAAGTVLQAGTGTGQTLIGGSGGQLLGTSTVAGASATIFGGSGADTVVA 138
Query: 713 LGGYNTHTQIGSGNGLWLAAGGFNVMTQVGKGDVAAVLAGGANVLTKMGEGELTSGMLGG 772
G N T G+GN A GG N + G V A G N G G + GG
Sbjct: 139 AAGNNVLT-AGAGNNQIHAIGGNNQIFAAGND---TVFAAGGNATIGAGTGNSQLLITGG 194
Query: 773 ANVITHISNDDQLSNTTAVALGGANILTKKGKGNTLAVMGGGANVLTHVGDGTTTG-VMV 831
N+I NTT + G N + G GNT G G ++L +G +G ++
Sbjct: 195 NNLIA-----GGQGNTTIASAAGNNTIF-GGSGNTTIAGGAGNDLL--IGSTAKSGKAVI 246
Query: 832 GGANILTKVGNGDTTGILLGVGNVLTHVGDGQTL----GVMGAAGNIFTKVGDGTSIAVM 887
GG + GN DT I+ GVGN G G + V G ++ GT + +
Sbjct: 247 GGFD-----GN-DT--IIGGVGNDTLFGGAGNDIFVFSTVFGGGKHVIGDFKAGTDLIAV 298
Query: 888 IGAG 891
G G
Sbjct: 299 QGYG 302
Score = 53.1 bits (126), Expect = 1e-10
Identities = 75/291 (25%), Positives = 113/291 (38%), Gaps = 35/291 (12%)
Query: 586 SSGDVRFNGAGGGNVIKSNVTRGNVHFNGGGIANVILHSS--QFGNTEFNGGGAANVIVK 643
S+ GAG NV+ +N G V G G ++ S Q T G +A +
Sbjct: 71 SNAATLLGGAGNNNVLVANDAAGTVLQAGTGTGQTLIGGSGGQLLGTSTVAGASATIFGG 130
Query: 644 SGEEGDLTFRGAGLANVLVHQSEQGKMDVYAGGAVNVLVRLGDGQYLAHLLAYGNISVQK 703
SG + T A NVL + G ++A G N + G+ A A GN ++
Sbjct: 131 SGAD---TVVAAAGNNVLT--AGAGNNQIHAIGGNNQIFAAGNDTVFA---AGGNATIGA 182
Query: 704 GSGDSRVVMLGGYNTHTQIGSGNGLWLAAGGFNVMTQVGKGDVAAVLAGGANVLTKMGEG 763
G+G+S++++ GG N G GN +A G N T G + G N L
Sbjct: 183 GTGNSQLLITGGNNLIAG-GQGNTTIASAAGNN--TIFGGSGNTTIAGGAGNDLLIGSTA 239
Query: 764 ELTSGMLGGANVITHISNDDQLSNTTAVALGGANILTKKGKGNTL----AVMGGGANVLT 819
+ ++GG + N T + G N G GN + V GGG +V+
Sbjct: 240 KSGKAVIGGFD-----------GNDTIIG-GVGNDTLFGGAGNDIFVFSTVFGGGKHVIG 287
Query: 820 HVGDGTTTGVMVGGANILTKVGNGDT-TGILLGVGNVLTHVGDGQTLGVMG 869
GT + G +V + T TG G+ + + DG + V G
Sbjct: 288 DFKAGTDLIAVQGYGLTAAQVASRVTVTG-----GSSVLSLSDGTQITVAG 333
Score = 51.2 bits (121), Expect = 5e-10
Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 12/150 (8%)
Query: 31 SADDGNNNIVAIGFGGQIHAYGGDDHVTVGSIGATVYTGSGNDTVVGGSAYLKVEDSTGH 90
+A GNN I AIG QI A G D TV+ GN T+ G+ ++ + G+
Sbjct: 146 TAGAGNNQIHAIGGNNQIFAAGND----------TVFAAGGNATIGAGTGNSQLLITGGN 195
Query: 91 LIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGAAAYNGITRKGLSGNV 150
++ G G I + N F G+ GN D+ G A G GN
Sbjct: 196 NLIAGGQGNTTIASAAGNNTIFGGSGNTTIAGGAGN--DLLIGSTAKSGKAVIGGFDGND 253
Query: 151 TFAGAGGYNALWHETNQGNLSFTGAGAGNK 180
T G G + L+ F+ G K
Sbjct: 254 TIIGGVGNDTLFGGAGNDIFVFSTVFGGGK 283
Score = 50.4 bits (119), Expect = 9e-10
Identities = 71/292 (24%), Positives = 107/292 (36%), Gaps = 49/292 (16%)
Query: 32 ADDGNNNIVAIGFGGQIHAYGGDDHVTVGSIGATVYTGSGNDTVVGGSAYLKVEDSTGHL 91
A G + G GGQ+ TV AT++ GSG DTVV + G+
Sbjct: 98 AGTGTGQTLIGGSGGQLLGTS-----TVAGASATIFGGSGADTVVA---------AAGNN 143
Query: 92 IVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGAAAYNGITRKGLSGNVT 151
++ AG I+ G N F AAG ++ G + + G +GN
Sbjct: 144 VLTAGAGNNQIHAIGGNNQIF--AAGNDTVFAAGGNATIGAG-------------TGNSQ 188
Query: 152 FAGAGGYNALWHETNQGNLSFTGAGAGNKLDRTWSNRYQGSHGDVTFDGAGAANSISSRV 211
GG N + QGN + A N + + GS GAG I S
Sbjct: 189 LLITGGNNLI--AGGQGNTTIASAAGNNTI-------FGGSGNTTIAGGAGNDLLIGSTA 239
Query: 212 ETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRI----ERTHQAEDVYTQTRGNIRFE 267
++G G ++ ++ G VG+ TL G GA N I + V +
Sbjct: 240 KSGKAVIGGFDGNDTII--GGVGNDTLFG-GAGNDIFVFSTVFGGGKHVIGDFKAGTDLI 296
Query: 268 GVGGYNSLYSDVAHGDIHFSGGGAYNTIIRKGSGNDFAKEGMTNAKADEIVL 319
V GY + VA + +GG ++++ G G+TN A +
Sbjct: 297 AVQGYGLTAAQVA-SRVTVTGG---SSVLSLSDGTQITVAGVTNLTASNFAV 344
Score = 46.6 bits (109), Expect = 1e-08
Identities = 87/343 (25%), Positives = 125/343 (36%), Gaps = 54/343 (15%)
Query: 1068 LGDDFM----GVVAAAKANVVTHVGDATTAAVLAGKGNILTKVGEGTTVGLLISDVGNVM 1123
LGDD + GVVA + + V + + AA L G G G L+ +D +
Sbjct: 44 LGDDALQQNKGVVALSSESNTALVLNTSNAATLLG--------GAGNNNVLVANDAAGTV 95
Query: 1124 THVGDGTTIGIAKGKANLITKVGDGLGVNVTWG-QANVFTQVGDGDRYNFAKGEANLITK 1182
G GT + G G LG + G A +F
Sbjct: 96 LQAGTGTGQTLIGGSG------GQLLGTSTVAGASATIFG-------------------- 129
Query: 1183 VGDGQEVSVVQGEANIITHVGNGDDYTGAWGKANVITKVGHGQNVVLAKGEANIVTQVGD 1242
G G + V N++T G G++ A G N I G+ + V A G N G
Sbjct: 130 -GSGADTVVAAAGNNVLT-AGAGNNQIHAIGGNNQIFAAGN--DTVFAAG-GNATIGAGT 184
Query: 1243 GDSFNALWSKGNIVTKVGDGMQVTAAKGQANITTTVGNGLNVTAAYGDANINTKVGDGVS 1302
G+S L + GN + G G T A N T G+G N T A G N S
Sbjct: 185 GNS-QLLITGGNNLIAGGQG-NTTIASAAGNNTIFGGSG-NTTIAGGAGNDLLIGSTAKS 241
Query: 1303 VNVAWGKYNINTKVGDGLNVAVMKGKANANIHV-----GDGLNINASYAQNNVAIKVGNG 1357
G ++ N + G+ + G A +I V G G ++ + I V
Sbjct: 242 GKAVIGGFDGNDTIIGGVGNDTLFGGAGNDIFVFSTVFGGGKHVIGDFKAGTDLIAVQGY 301
Query: 1358 DFYSLAVAS--SNTSSNKLSALFDNIKQTVLGVGGSQAINYLV 1398
+ VAS + T + + +L D + TV GV A N+ V
Sbjct: 302 GLTAAQVASRVTVTGGSSVLSLSDGTQITVAGVTNLTASNFAV 344
Score = 35.8 bits (81), Expect = 2e-05
Identities = 53/226 (23%), Positives = 77/226 (34%), Gaps = 47/226 (20%)
Query: 78 GSAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGAAA 137
G L E +T L++ + + +G+ NV A A G + G GG+
Sbjct: 54 GVVALSSESNTA-LVLNTSNAATLLGGAGNNNVLVANDAAGTVLQAGTGTGQTLIGGSGG 112
Query: 138 YNGITRKGLSGNVTFAGAGGYNALWHETNQGNLSFTGAGAGNKLDRTWSNRYQGSHGDVT 197
L G T AGA F G+GA + +N G+
Sbjct: 113 Q-------LLGTSTVAGASA------------TIFGGSGADTVVAAAGNNVLTAGAGNNQ 153
Query: 198 FDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTHQAEDVY 257
G N I + GN T AG G+ T+ GAG N ++
Sbjct: 154 IHAIGGNNQIFA---AGNDTVFAAG-----------GNATI-GAGTGNSQLLITGGNNLI 198
Query: 258 TQTRGNIRFEGVGGYNSLYSDVAHGDIHFSGGGAYNTIIRKGSGND 303
+GN G N+++ GG+ NT I G+GND
Sbjct: 199 AGGQGNTTIASAAGNNTIF------------GGSGNTTIAGGAGND 232
Score = 33.5 bits (75), Expect = 1e-04
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 27/161 (16%)
Query: 576 LFKPANDSGESSGDVRFNGAGGGNVIKSNVTRGNVHFNGGGIANVILHSSQFGNTEFNG- 634
+F ND+ ++G GAG GN + +T GN + GG N + S+ NT F G
Sbjct: 163 IFAAGNDTVFAAGGNATIGAGTGNS-QLLITGGN-NLIAGGQGNTTIASAAGNNTIFGGS 220
Query: 635 ------GGAANVIV-----KSGE------EGDLTFRGAGLANVLVHQSEQGKMDVYA--- 674
GGA N ++ KSG+ +G+ T G G+ N + + V++
Sbjct: 221 GNTTIAGGAGNDLLIGSTAKSGKAVIGGFDGNDTIIG-GVGNDTLFGGAGNDIFVFSTVF 279
Query: 675 GGAVNVLVRLGDGQYLAHLLAYGNISVQKGSGDSRVVMLGG 715
GG +V+ G L + YG + Q SRV + GG
Sbjct: 280 GGGKHVIGDFKAGTDLIAVQGYGLTAAQVA---SRVTVTGG 317