Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 721 a.a., Type I secretion system ATPase, LssB family LapB from Pseudomonas fluorescens FW300-N2E2

 Score =  291 bits (745), Expect = 8e-83
 Identities = 165/585 (28%), Positives = 316/585 (54%), Gaps = 14/585 (2%)

Query: 120 EVISSHELNSTWNKKSLVIQQAQSRFDI----------TWFIPEFLQHKRVLSEILLFSF 169
           EV  S EL +      +   Q Q +FD+          +WF     + + + ++ +  S 
Sbjct: 121 EVTISRELLADDYSGKVFFAQPQHKFDVNHGTLIPRARSWFRDTLKRSRWLYADAIAASL 180

Query: 170 VLQILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVIEVVLRGLREYQYAHTANR 229
           ++ I+A+ +PLF   V D+V+ +QA STL VL  G++   V +++L+ LR         +
Sbjct: 181 LINIIAMAAPLFVMNVYDRVVPNQAESTLWVLAVGIIGAYVFDLILKMLRSLCLDLAGKK 240

Query: 230 IDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRELDTIREFLTGSMFTLTVELLFMFVF 289
            D+ +   L + + G+ + +  +R VG+    + E  ++R+FL     T  ++L F  + 
Sbjct: 241 TDLIISATLFERIVGMSMKYRPAR-VGSFAQNIHEFQSLRDFLASLTLTSLIDLPFTLLI 299

Query: 290 LYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTSFLTETVAGSET 349
             V++++   L  + +   P  +L+ + L   + A +E+  +  A   S L ET+AG + 
Sbjct: 300 FMVIAIIGGHLVWIPVLAFPIALLIGYALQKPLVATMERTMALGAERQSSLIETLAGLDA 359

Query: 350 LKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAILWLGATEVLS 409
           +K    E     +W++    +      V+ L+  + ++  L+Q++  V ++  G   +++
Sbjct: 360 VKVNNAESERQYQWEQTIGTLSRLELRVKMLSGLAMNITLLIQQLAGVIMIVFGVYLIIA 419

Query: 410 LEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVEQHTGSDNVT 469
             +++G L+A  M++     PLA +  L  ++ Q RV +  +  M+ LP E++     ++
Sbjct: 420 GNLSMGGLVACYMLSGRALSPLASLSGLLTRYQQARVTMTSVDQMMELPQERNFDERPLS 479

Query: 470 ---ISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYS 526
              + GA+  + + F Y     P + +++L I+ GE +G++G SGSGKS+LA+LL+ LY 
Sbjct: 480 RKVLQGAVECRQLNFTYPNQQNPALKNINLVIKPGEKIGIIGRSGSGKSSLAKLLVGLYQ 539

Query: 527 PEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASLEEIIEAAK 586
           P+ G++ +DG+ +  I+V +LR  +G V Q+  L   ++ +N+         E +++AA+
Sbjct: 540 PDDGALLVDGVDIRQIDVSELRYNIGYVPQDIQLLAGTLRDNLTSGARYVEDELVLQAAE 599

Query: 587 LSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSALDDES 646
           L+G H+F    P GY+  + E GQ+LSGGQRQ +A+AR LL +P +L+LDE TSA+D+  
Sbjct: 600 LAGVHEFARLHPQGYELQVGERGQNLSGGQRQNVALARALLLNPPILLLDEPTSAMDNTG 659

Query: 647 QAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQG 691
           +  ++  +A++   +TV+ + HR S +   DR++V+ +G I+  G
Sbjct: 660 EERLKQRLAAVVENKTVLLVTHRASLLSLVDRLLVIDRGQILADG 704