Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 718 a.a., Type I secretion system ATPase, LssB family LapB from Pseudomonas fluorescens FW300-N1B4

 Score =  297 bits (761), Expect = 1e-84
 Identities = 169/599 (28%), Positives = 321/599 (53%), Gaps = 14/599 (2%)

Query: 106 KDKCLIQRPNKETPEVISSHELNSTWNKKSLVIQQAQSRFDI----------TWFIPEFL 155
           +D+  +     +  EV  S EL +      +   Q Q +FD+          +WF     
Sbjct: 104 EDQARLLLSESDGGEVCVSRELLADDYSGKVFFAQPQHKFDVNHGTLIPRARSWFRDTLK 163

Query: 156 QHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVIEVVL 215
           + + + ++ +  SF++ I+A+ +PLF   V D+V+ +QA STL VL  G+    + +++L
Sbjct: 164 RSRWLYADAIAASFLINIIAMAAPLFVMNVYDRVVPNQAESTLWVLAIGITGAYLFDLIL 223

Query: 216 RGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRELDTIREFLTGS 275
           + LR         + D+ +   L + + G+ + +  +R VG+    + E  ++R+FL   
Sbjct: 224 KSLRSLCLDLAGKKTDLIISATLFERIVGMAMKYRPAR-VGSFAQNIHEFQSLRDFLASL 282

Query: 276 MFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAA 335
             T  ++L F  +   V+++L   L  + +   P  +L+ + L   + A +E+  +  A 
Sbjct: 283 TLTSLIDLPFTLLIFMVIAILGGHLVWIPVLAFPIALLIGYALQKPLVATMERTMALGAE 342

Query: 336 NTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKIT 395
             S L ET+AG + +K    E     +W++    +      V+ L+  + ++  L+Q++ 
Sbjct: 343 RQSSLIETLAGLDAVKVNNAESERQYQWEQTIGTLSRLELRVKMLSGLAMNITLLIQQLA 402

Query: 396 SVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDML 455
            V ++  G  +++   +++G LIA  M++     PLA +  L  ++ Q RV +  +  M+
Sbjct: 403 GVIMIVFGVYQIIDGHLSMGGLIACYMLSGRALSPLASLSGLLTRYQQARVTMTSVDQMM 462

Query: 456 NLPVEQHTGSDNVT---ISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGS 512
            LP E++     ++   + GAI  + + F Y     P + +++L I+ GE +G++G SGS
Sbjct: 463 ELPQERNFDERPLSRKVLQGAIECRQLNFTYPDQQNPALKNINLIIKPGEKIGIIGRSGS 522

Query: 513 GKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQS 572
           GKS+LA+LL+ LY P+ G++ +DG+ +  I+V +LR  +G V Q+  L   ++ +N+   
Sbjct: 523 GKSSLAKLLVGLYQPDDGALLVDGVDIRQIDVSELRHNIGYVPQDIQLLAGTLRDNLVSG 582

Query: 573 KPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKV 632
                 E +++AA+L+G H+F    P GY+  + E GQ+LSGGQRQ +A+AR LL +P +
Sbjct: 583 ARYVEDELVLQAAELAGVHEFARLHPQGYELQVGERGQNLSGGQRQNVALARALLLNPPI 642

Query: 633 LILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQG 691
           L+LDE TSA+D+  +  ++  +A++   +TV+ + HR S +   DR++V+ +G I+  G
Sbjct: 643 LLLDEPTSAMDNTGEERLKQRLAAVVENKTVVLVTHRASLLSLVDRLLVIDRGQILADG 701