Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 720 a.a., Type I secretion system ATPase, HlyB from Pseudomonas syringae pv. syringae B728a

 Score =  591 bits (1523), Expect = e-173
 Identities = 314/683 (45%), Positives = 451/683 (66%), Gaps = 9/683 (1%)

Query: 38  ISGNREKIKDESHLTDTENFKEELDKIQKEHKVKIRTKISQFKNIESLKTPAILFDQHDL 97
           ++ + E++  E    D    ++ L    ++  +K +   +  + ++    PAI  D +  
Sbjct: 33  VAASPEQLAHEFGSPDQYLSQDSLLLAARKLGLKAKAARTTTERLDRTPLPAIAADNNGG 92

Query: 98  PFITAKTNKDKCLIQRPNKETPEVISSHELNSTWNKKSLVIQQA------QSRFDITWFI 151
            FI A+ ++ K LI  P  + PEV++   L   W  + L+I+         S FD TWFI
Sbjct: 93  FFIIARLDQGKALIHDPFSQRPEVVTFEALQERWTGQLLLIRSEAGTPGESSSFDFTWFI 152

Query: 152 PEFLQHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVI 211
           P  ++++++L E++L SFVLQI +LI+PLFFQVVMDKVLVH   +TLDV+  GL    + 
Sbjct: 153 PAIVKYRKLLGEVMLVSFVLQIFSLITPLFFQVVMDKVLVHHGLTTLDVIAIGLAGVMLF 212

Query: 212 EVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRELDTIREF 271
           E  L GLR Y +AHTA+RID++LG KL +HL  LPL +F++R+VG  V RVREL+ IR F
Sbjct: 213 ESALSGLRTYVFAHTASRIDVELGSKLFRHLITLPLSYFQARRVGDSVARVRELENIRNF 272

Query: 272 LTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFS 331
           LTG+  TL +++LF  VF+ VM   S  LT + + ++P Y+L++  +TP ++  +   F+
Sbjct: 273 LTGNAITLLLDVLFSVVFIAVMFYYSGWLTLIVLLSLPLYILVSVLITPVLRKRLNDSFA 332

Query: 332 HAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLL 391
             A N +FL ETV G +TLKS+AVEP+ IR+WD Q    V  G+  Q L+  +N  V L+
Sbjct: 333 RGAENQAFLVETVNGIDTLKSMAVEPQAIRKWDNQLAGYVAAGFKTQNLSTIANESVSLI 392

Query: 392 QKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKL 451
            K+ +VA LW GA  V+  ++++GQLIAFNM+   +AQP+ R+ +LW  F QT V++++L
Sbjct: 393 GKLVTVATLWFGARLVIDGQLSVGQLIAFNMLAGRVAQPIMRLAQLWTNFQQTGVSVQRL 452

Query: 452 GDMLNL--PVEQHTGSDNVTISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGT 509
           GD+LN    + Q   S    I G I F  + FRY+PD    +  ++L I  G+ +GVVG 
Sbjct: 453 GDILNTRNELSQVNRSALPPIKGRIEFDQVHFRYRPDGSEILRGINLVITPGQVIGVVGR 512

Query: 510 SGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENI 569
           SGSGKSTL RLL RLY PE+G + +DG+ L   +V  LR+++GVVLQ+N LF++S+ ENI
Sbjct: 513 SGSGKSTLTRLLQRLYVPERGRVLVDGMDLALADVSSLRRQIGVVLQDNMLFNRSIRENI 572

Query: 570 AQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSD 629
           A S   A LE +++ AKL+GAHDFIL+LP GYDT++ E G SLSGGQRQR+AIAR L+ +
Sbjct: 573 ALSDAGAPLEAVMQMAKLAGAHDFILELPEGYDTMVGEHGASLSGGQRQRIAIARALMGN 632

Query: 630 PKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVE 689
           P++LI DEATSALD ES+ ++Q NM +I +GRTVI IAHRLS VRD +RI+V+ +G IVE
Sbjct: 633 PRILIFDEATSALDYESERIVQQNMQAICKGRTVIIIAHRLSAVRDANRIVVVDRGQIVE 692

Query: 690 QGSHQQLLAY-GKQYKQLWQLQQ 711
           QG+H +LL +    Y +L +LQQ
Sbjct: 693 QGTHAELLTHQAGHYSRLHRLQQ 715