Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., ABC transporter ATP-binding protein from Synechocystis sp000284455 PCC 6803

 Score =  259 bits (662), Expect = 3e-73
 Identities = 190/588 (32%), Positives = 307/588 (52%), Gaps = 39/588 (6%)

Query: 151 IPEFLQHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDV---------L 201
           +P   ++ + L+  L+    +     + PL     +  +    AW  LD          L
Sbjct: 21  LPYVKRYPKELAAALVLLIPVAFSGAVQPLIIGQAVSLLREEPAWGFLDAMPLDRALHTL 80

Query: 202 VFGLVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTR 261
           V  L +T VI ++  GL+ +        I   +   L +H+  L + FF    VG +VTR
Sbjct: 81  VIILAVTIVIRLLFLGLQGFIVQKMGQEITADVRQDLFEHVTSLSVNFFHRTPVGRLVTR 140

Query: 262 VR-ELDTIRE-FLTGSMFTLT--VELLFMFVFLY-VMSLLSAPLTGLFIATVPCYVLLAW 316
           +  +++ + E F +G++  ++  V +L + V ++ V   L+  L G+    VP  VL+ +
Sbjct: 141 ITSDVEALGEVFASGAIGVVSDIVSILAIIVTIFWVQWQLALLLVGML---VPVTVLIIY 197

Query: 317 WLTPRMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEP---RFIRRWDEQTEKMV-- 371
           +     +A  + +   +  N+  L E VAG   ++    E    R  RR +E+  + V  
Sbjct: 198 FQQQYRKANYQAREELSRLNSQ-LQENVAGINVVQLFRREELNSRSFRRVNEKYRRAVDK 256

Query: 372 TTGYDVQQLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPL 431
           T  +D     +  +  ++ +  +    +L LG   +L   +  G L AF +    +  PL
Sbjct: 257 TIFHD-----SAVSATLEWISLVAIAGVLGLGGWLILRDNLEFGVLAAFILYGQRLFNPL 311

Query: 432 ARMVELWGQFIQTRVAIEKLGDMLNLPVE--QHTGSDNVTISGA-------ISFKNILFR 482
            +  + +  F     AIE++G+++  PVE         + I+GA       I F+N+ F 
Sbjct: 312 RQFADKFTMFQSGFTAIERIGELMEEPVEIKDQAVITPIEINGALRGSHGEICFENVWFG 371

Query: 483 YQPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHI 542
           Y+PD    + +L+  I+ GE + +VG +G+GKS++ RLL RL+ P +G I +DGI +  +
Sbjct: 372 YKPD-EYVLKNLNFTIKPGEKVALVGPTGAGKSSIIRLLCRLHDPSRGRILVDGIDIREL 430

Query: 543 NVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYD 602
           + QQLR+ +GV+LQ++FLF   V  NI   + E SLEE+  AA+L+     I +LP GY 
Sbjct: 431 SQQQLRRFIGVILQDSFLFAGDVKRNITLGE-EYSLEEVQRAAQLTSVDRLIEELPQGYH 489

Query: 603 TVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRT 662
           T L E G +LSGGQ+Q LA AR  + +P VL++DEAT++LD  ++A IQA +  + + RT
Sbjct: 490 TQLRERGSNLSGGQKQLLAFARVAIREPYVLVMDEATASLDVRTEADIQAALLHLLQDRT 549

Query: 663 VITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQ 710
            I IAHRLST+R+ DRI VL  G IVE G+H QLL     Y  L+QLQ
Sbjct: 550 SIIIAHRLSTIRNVDRIFVLKHGEIVETGNHDQLLDLKGLYASLYQLQ 597